| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4483 |
|---|
| Symbol | |
|---|
| ID | 4975796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 4770529 |
|---|
| End bp | 4771209 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640458712 |
|---|
| Product | NADH dehydrogenase subunit C |
|---|
| Protein accession | YP_001135740 |
|---|
| Protein GI | 145225062 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00208368 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGACGGAGC CGACCGGCGA CCAGACACCC GAGATCATCG GTGTACGGCG TGGCATGTTC
GGCGCCAAGG GCTCTGGGGA CACCTCGGGC TACGGTCGGC TGGTCCGTCC CGTCGCCCTT
CCCGGCGGCA GTCCGCGCCC GTACGGCGGC TATTTCGACG AGGTGGTGGA CAGACTCGCC
GAGGCCGTCG GCGACGATGC GTTCACCGAG TCGATCGAAC GCGTCGTGAT CCACCGCGAC
GAGCTCACCC TTGAGGTGCA CCGGGACCGC CTCGTGGAGG TGGCCCAGGC GTTGCGTGAC
GATCCGGCGT TGCGCTTCGA ACTGTGCCTC GGTGTCAGCG GCGTGCACTA CCCCGACGAC
ACCGGCCGGG AGCTGCACGC CGCGTATCCG CTGATGTCGA TCACCCACAA CCGTCGCATC
CGCCTGGAAG TGGCTGTCCC CGACGATGAT CCGCACATCC CGTCGTTGTT CGGCGTCTAT
CCGACGGTCG ACTGGCACGA GCGCGAGACC TACGACTTCT TCGGCATCAT CTTCGACGGG
CATCCCTCGC TGACCCGTAT CGAGATGCCC GACGACTGGG TGGGCCACCC GCAGCGGAAG
GACTATCCGT TGGGTGGCAT CCCGGTCGAG TACCACGGGG CGGAGATCCC GCCGCCCGAT
CAGCGCAGGG CGTACAACTG A
|
|---|
| Protein sequence | MTEPTGDQTP EIIGVRRGMF GAKGSGDTSG YGRLVRPVAL PGGSPRPYGG YFDEVVDRLA
EAVGDDAFTE SIERVVIHRD ELTLEVHRDR LVEVAQALRD DPALRFELCL GVSGVHYPDD
TGRELHAAYP LMSITHNRRI RLEVAVPDDD PHIPSLFGVY PTVDWHERET YDFFGIIFDG
HPSLTRIEMP DDWVGHPQRK DYPLGGIPVE YHGAEIPPPD QRRAYN
|
|---|
| |