Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_4474 |
Symbol | |
ID | 4975787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 4759382 |
End bp | 4762315 |
Gene Length | 2934 bp |
Protein Length | 977 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640458703 |
Product | regulatory protein, LuxR |
Protein accession | YP_001135731 |
Protein GI | 145225053 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0017385 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCTGTCA CAGTGCTCGG CGCGCAGCCG ACGAAGTTCG CTGACCGTCA TGCCGACCCG GTGACCGCGC GGGCGCTGCA CGTCCCGGTG CAACAGGTCT GGGGGTACCG CAGTGATCGA TCCGCAGTGT CATCCGATAG GCCACCCGCG GTCCACCGAC CGATGAGCGA GGAACGGGGC GACGAATACG TCGTCAGCTT CGTCGAGTCG ATGACCCGGC GTCCGGCGGC CCTGGTGATC CAGGGGGAGC CCGGGATCGG TAAGACGACT CGGTGGATGG ATGTCTGCGA GGAGGCGCGA CGCGCGGGTG TGCGGGTGCT CTCGACGCGG TCCGGCGTCG GCGAATCGGC GCTCGACTTC GTCGGTGTCG ACGACCTGCT CGCCGACGTC GAACCCGAGG TGTTCGACGC GCTGCCGATC GCGCAGCGCA CGGCCCTGCG ACAGGTTCTG GTCCGCTCCG GCGCCGACGG TACCGAGATC GACAGACGCG CTGCAATCGG CGCGTTCCGG GCTCTGGTCG CGGAACTGGC CACCCGCACA CCGGTGTTGA TCGGCGTCGA CGACGTGCAA TGGCTCGACG AGGCGACCCG CGACGCCCTG GTCTACACGA TGCGCCGGGT GCGTGGCCCG GTCGCGGTCG TGGTCACCGA GCGTGCCGTG ACCGGACGGG GAAGCGCGGT GTCCTGGCTC GACCTCGGAG AGGCCGGATC CGTCACACGC CTGGTGGTCC GACCGATGTC GGTGGCTGAA CTGCACCGCC TCGTGGCCGG CCGGACGGGG CGGTCCCTCT CGCGGCCTGC GATGGCGCGG CTCGCGGAGA TGTCGGGTGG AAATCCCTAC TACGCACTGG AACTCGCGCA GGCCATGGAC TCCGCCGGCT GGGTATGGAG CGCGGGACTG CCGTCGAGCC TGGTCGACGC CACCGGTCTG CACAGGGAGC GGCTCGACGC GGACGTCAAC GAGGTCCTGC TCGCCGCCGC ATCCGTCGTC GGGCCCACCG TCGACCTGCT CGCCGCCGTG CTGCACCGTC CGGTCGAGCA GATCGTCGGA TCGCTGGAGA AGGCCGAAAA TCTCGGTATC GCCTCGATCG AGGCCGGCCG CGTGGGCTTC TCACATCCAC TGCTGCCCCA CATCATCTAC AGCCAGGCAC GGCCGGGTGA GCGCAGACGG ATCCACCGCG CCGTCGCCTC GGTCGAACCG TCGCCGCAAC GGCAGGCACG GCACCTGGCG TTGGCGGCGA CGACCGGCGA CCCCGAGATC CTGCGCGCCC TCGATTCGGC CGCCGAGACG GCACGCGCCG ACGCTGCGCC GGCGACCGCG GCGGAACTCA CGGAGTTCGC GATCGGTCTC GGCGGCGACA CACCTGTGCG ACGTCTGCAC GCTGCCCGCG ACCACCTGCT GGCCGGCGAC ATCGACCGCT CGCTGGCGCT CCTGGAACCC ACCGCGCAGG GTCTGCCCGA CGGGCTGATG CGGGCCCACG CACGCGTTCT GGTCGGTGGT GCGCTCGCGG TGCGCGGGAC TTTCGGTCGA GCCGTCGACG AACTGCGGGT CGCACTCGCC GATGCGGCCG GGGATCCGGG CCTGACGGTA CAGATACAGC TGGCTCTGGC GATGACGCTG TCGGCCGCCG GAGACCACGA CGGTGCCGAT GACCATGTAC GACAGGCACG GATGCACGCC GAAGGCATGG CCGACCACGT TCTGACCAGT CAGGCGCTGG CCGCGCAGGT GCTGGTCCGG ACGGCGAACG GTGAAGTGGC GGACGAGGTT TCACTGCGGC GGGCCGCCGA CCTGGAGCAA CGCGTTCACC ACACCTCTGA ACTCCCGGCT GGCGTCCACA CCGCCGCGCC GTTCAGCGCA CGGGTGGTCA AAGCGCTGGT CTCGGTGTGG ACCGGGCGAC TCAACGAAGG CCGGGCACAA CTCGCCGAGG CGCAGGCCCG GTATGCCGCC CGCGGATCCG ATGTCGATGT GCTCTGGATC CAGTTCCACT CGGCGATGAC AGACATCTGG CTGGGACGAC ACGGCGACGC CGCGCGTCTC GCCGAGGACA TGCTGCTGGG CGCCGAGCAG CTCGGAGGTA CCGCGGCGAG GGCGCTGGCC GCCGAACCGC GCGCGCTGCT CGCCACGCTG GAGGGTCGGG AGTCCGATGC CAGAGCCGAG GTGGATCAGG TGCTCGAGCA GGTCTCAGAC GACGTGCCGC CCAGCAACGG ACTCCGAACG GTCCTGGGCT TCCTGGAGTT GTCCCTCGGG CGTCACGCAG CCGCGGTCGA CGTGTTGTCC CCGTTGCTGG CGCGCAGCCG GACCGGCGGG AGCATCGAGA TCGCGACGCT GCGTTTCCTG CCCGACCTTC TGGAAGCGGC GTTCTCGGTG GGGCGCGTCG ATGAGTTCGC GGCGTGGGTC GATGCCCTGG AGGACGCCGG TACCCGGCTG AACCGTCCAT GGATCGTCGC GGTCGCGGCA CGCTGCCGCA CCATGCAGTT GGCCGCACGC GGAGAACTCG CCGCAGCACA GGTCACCGCG CTGCGCGCAC TCGACGCGCA CCGCGGACTG CCGATGCCGT TCGAACTCGC CCGTACTCAG CTCATCGTCG GGCAACTGCA GCGACGGCTA CGCCAGAAAC GGCTGGCCCG AACGACATTG ACGGAGGCAC TGACCATTTT CGAACAACTC GGGACCCCAC TGTGGGCGGC TCGCGCCCGC ACCGAACTCG CCCGCACCGC GGAGAGCCCG CAGCAGCATC TGCTGACCGC CACCGAACAG CGCGTCGCCG AGCTGGTGGC GTCGGGACTC ACCAACAAGG ACGTCGCGGC CGCGCTCTAC ATCAGCCCGA AGACGGTGGA GCACAACCTG GGCCGGGTCT ACCGCAAGCT CGGAATCCGC AACCGCACCG AACTGGGCCG CCAGATGGAC AGTCTGCGCG ACGGGCCGAA CTGA
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Protein sequence | MPVTVLGAQP TKFADRHADP VTARALHVPV QQVWGYRSDR SAVSSDRPPA VHRPMSEERG DEYVVSFVES MTRRPAALVI QGEPGIGKTT RWMDVCEEAR RAGVRVLSTR SGVGESALDF VGVDDLLADV EPEVFDALPI AQRTALRQVL VRSGADGTEI DRRAAIGAFR ALVAELATRT PVLIGVDDVQ WLDEATRDAL VYTMRRVRGP VAVVVTERAV TGRGSAVSWL DLGEAGSVTR LVVRPMSVAE LHRLVAGRTG RSLSRPAMAR LAEMSGGNPY YALELAQAMD SAGWVWSAGL PSSLVDATGL HRERLDADVN EVLLAAASVV GPTVDLLAAV LHRPVEQIVG SLEKAENLGI ASIEAGRVGF SHPLLPHIIY SQARPGERRR IHRAVASVEP SPQRQARHLA LAATTGDPEI LRALDSAAET ARADAAPATA AELTEFAIGL GGDTPVRRLH AARDHLLAGD IDRSLALLEP TAQGLPDGLM RAHARVLVGG ALAVRGTFGR AVDELRVALA DAAGDPGLTV QIQLALAMTL SAAGDHDGAD DHVRQARMHA EGMADHVLTS QALAAQVLVR TANGEVADEV SLRRAADLEQ RVHHTSELPA GVHTAAPFSA RVVKALVSVW TGRLNEGRAQ LAEAQARYAA RGSDVDVLWI QFHSAMTDIW LGRHGDAARL AEDMLLGAEQ LGGTAARALA AEPRALLATL EGRESDARAE VDQVLEQVSD DVPPSNGLRT VLGFLELSLG RHAAAVDVLS PLLARSRTGG SIEIATLRFL PDLLEAAFSV GRVDEFAAWV DALEDAGTRL NRPWIVAVAA RCRTMQLAAR GELAAAQVTA LRALDAHRGL PMPFELARTQ LIVGQLQRRL RQKRLARTTL TEALTIFEQL GTPLWAARAR TELARTAESP QQHLLTATEQ RVAELVASGL TNKDVAAALY ISPKTVEHNL GRVYRKLGIR NRTELGRQMD SLRDGPN
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