| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4420 |
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| Symbol | |
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| ID | 4975733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | - |
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| Start bp | 4701015 |
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| End bp | 4703015 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640458648 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_001135677 |
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| Protein GI | 145224999 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.349812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCA CCACAGCGTC GACGGTGGAG AGCACCGCCC TCGGGCAGGT GGACGATCAG
GACAAACCCG GTCGAGAGTT GCGTGGGTGG ACCTACGGAT TGGTCGCCGT GGTGGCGTTC
GCGGTGGCGG TCCTGACGAT CTGGCAGGTG TTCCGGCCGC TCTCGCAGGG CAGCCAGTAC
TACCTCATCG TGTTCCTGTC CGGCACACTG CCGCTCGTCT ACCTGGTGTA CCGGTCCGGA
TGGAGATGGT CGGACCCGGA AGATCGCCCG GGAGTGCTGG ACTGGGCCCT GGCCTTCGTC
GCGGTCCTCG TGTGCCTGTA TCCGGTGCTG GCCCCGGCGA TCGGCGCCGC GGGCGGCGGG
TACAACGCGT TCCTCGACAG GCAGGGCATG CTCGATCCGC TCGACGTCGT GATGGGCGCA
CTTTTGTTGG TGCTCATCAT CGAAGCCTGC CGGCGCACGA CCGGATGGGC GCTGCCGATC
GTGTGCGCGG CGTTCCTGGT CTACGGGTAC TACGGCGGGC TGATGCCCCA GGGCTGGGCG
ATCGCGCACG CCGGGCTGGA CTTCGACCAG ATCGTCGACG CGTTGTACAA CTCCGGGAGC
GGATTCTTCG GAACCCCTCT GGACGTCGCG GCGACCTACA TCGTGCTGTT CACGATCTAC
GGTGCGGTAC TGGAACTCTC GGGCGGCGCG CGCTTCTTCG TCAACCTGTC GGTGGCGGCC
TTCCGCCGCT CCCGCAGCGC GGCCGGTCGC ACGGCGGTCG CCTCCGGCTT CTTGCTCGGC
ACCGTGTCGG GCTCGGGCAC CGCGACCGCG GTGAGTGTGG GTGCGGTGAC GTGGCCGATC
ATGCGGCGTG CGGGTTACAC CCCCGAACGC GCGGGCGGCG TCCTGGCCGC GGCCGGGGTG
GGTGCGCTGC TGTCGCCACC GACGCTGGGC GCGGCGGCGT TCATCGTCGC GGAGTACCTC
GAGGTGTCGT ACCTGACGGT GCTCGGCTGG GCGATGATCC CGACCGGCCT GTACTACCTG
GGCATCCTGC TCGCGGTGGA GATCGACGCA CGCCGCTTCG GTATGAAGGC CGCGAACCTC
GATGCCGAGT CACCGTGGAA ACTGCTGGGC CGCTTCGGAT ATCACTTTTC GTCGTTGATC
GCGATCGTGG TGCTTCTCGC CGTGGGGATG TCGGCGACCA GGGCCGTGAT CTTCGCGACC
GCCCTCGCCT TCGTGCTGTC CTTCGCCGAC CGGCGCTTCC GGCTGACACC GCGTCGCCTG
TTCGGTGCGC TCAGCTCCGG TGTGCTCGGG GTGCTGCCCG TGGTCGCGGT GTGCGCGGCG
GCGGGTGTGA TCACCGCGAT GACGACCAAA ACCGGCCTGG GCGCGCAGTT CTCGTCCGTG
CTGGTCGGTG GTGTCGACGC GATCACCGAC AACCGCACGG TGATGCTGGC GCTCACCGCG
GTGTTCGCCG CGGTGGCCCT GGCGCTGCTC GGCCTCGCGA TCCCCGTGAC CGCGTCGTTC
GTGATCGGTT GGGTCATCAT CGGTCCCGCG CTGCTGGCCC TCGACGTCCC TGCCCCGGCG
GCGGCGATGT TCGTCTTCTA CTATTCGGTG CTTTCCGAGG TCACCCCGCC CACCGCGCTC
GCCGCAGTCG GCGCGTCGGC GGTCACCGGG GGACAGGCGA TCCCGACCAT GTGGCAGGCG
CTGCGCTACG CGGCACCGGC ATTCCTGGTC CCGATCGCGT TCGTGCTGAC CGGCCCCGGC
GAATACCTGC TCGCGCGAGG ACCGGTGCTC GGCGTGCTGT GGGCGTCCGC GGCCGCCTGC
GTCGGCATCG TCGCGCTGTC GTTCGCCGCG GGTGGCTGGG TGCTGGGGGT CGGCGCCATG
GGCCCGCCGG CCCGGGTGCT GACGGCCGTC GCGGCGTTGC TGTTGCTGTA CCTCCATCCC
GTGAGCATCG CCGCGGGATT CACGTGCCTG CTCTGCGCAG TCGCGTTCAC CTTCATCACC
GACAAGAGGA GACGACCATG A
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| Protein sequence | MDRTTASTVE STALGQVDDQ DKPGRELRGW TYGLVAVVAF AVAVLTIWQV FRPLSQGSQY
YLIVFLSGTL PLVYLVYRSG WRWSDPEDRP GVLDWALAFV AVLVCLYPVL APAIGAAGGG
YNAFLDRQGM LDPLDVVMGA LLLVLIIEAC RRTTGWALPI VCAAFLVYGY YGGLMPQGWA
IAHAGLDFDQ IVDALYNSGS GFFGTPLDVA ATYIVLFTIY GAVLELSGGA RFFVNLSVAA
FRRSRSAAGR TAVASGFLLG TVSGSGTATA VSVGAVTWPI MRRAGYTPER AGGVLAAAGV
GALLSPPTLG AAAFIVAEYL EVSYLTVLGW AMIPTGLYYL GILLAVEIDA RRFGMKAANL
DAESPWKLLG RFGYHFSSLI AIVVLLAVGM SATRAVIFAT ALAFVLSFAD RRFRLTPRRL
FGALSSGVLG VLPVVAVCAA AGVITAMTTK TGLGAQFSSV LVGGVDAITD NRTVMLALTA
VFAAVALALL GLAIPVTASF VIGWVIIGPA LLALDVPAPA AAMFVFYYSV LSEVTPPTAL
AAVGASAVTG GQAIPTMWQA LRYAAPAFLV PIAFVLTGPG EYLLARGPVL GVLWASAAAC
VGIVALSFAA GGWVLGVGAM GPPARVLTAV AALLLLYLHP VSIAAGFTCL LCAVAFTFIT
DKRRRP
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