| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4377 |
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| Symbol | |
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| ID | 4975690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | + |
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| Start bp | 4655950 |
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| End bp | 4657788 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640458604 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_001135634 |
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| Protein GI | 145224956 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.691102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGAGA GCCTGGACCT CGTCGTCACG TCGGTCGCCA CCCGGCTGAT GGGCGCGGGC
GCCGCGACGT GGGCCGAGGC CAGCCAGCAG GTGCTGGCCG ACCTCGTCGA GCATTTCGGC
GTCGATGTCA GCTTCCTGCG GCGCAACGAC CACACCATCC GCGCTTCGGT GCTGGTGGCC
GAATGGCCCG TCCGTCCGGG CATTCCGGAT CCCGACCCAT TGGCTGTCGT CTACTTCGCC
GATGCCGACC CCGTTTTCGC GCTGGCCGAG TTCCAGAAGG AGCCGCTGGT GTTCCGGCCG
GACGCGAACA CCGACGAATA CCAGAAGACC ATCGAGGAGG GGCGCCAGGT TCCCCAGGTG
TCGATGGCCG CCGTTCCGCT GTTGTCCGGG GATGTCACGA CCGGTGTGCT CGGATTCGTC
AAGTTCGGCG ACCGTGACTG GACCGGCGTC GAACTCAACG CGCTCAAAGC CATCGCGTCG
CTGTTCGCTC AGGTCCAGGC CCGGGTGGAA GCGGAAACTC AGCTCCGGTA CCTGGCCGAG
CACGACGACC TGACGGGGTT GAACAACCGG CGCGCGTTGC TGTCCCACCT CGACGGACGA
CTCGCCGAGG GGCAGCCCGG CCCCGTGTCG GCGTTGTTCT TCGACCTCGA CCGACTCAAG
GCCATCAACG ACTATCTCGG CCACACCGCG GGAGACTGGT TCATCCGGGT GCTGGCCGAA
CGTCTCAGGG AAGGGGCGGA CCCCCGTGCC CTGATCGCGC GCCTCGGCGG TGACGAGTTC
GTGGTCGTGC CCGCCGGACC GATGGACGGG GAGGCGGCCG AGTCGCTGGC CCACCAACTG
CAGTCGACGT TGAAGGAACG CGTGTCCATC GACGGTGAGA TGCTGACCCG AACGGTGAGT
ATCGGTGTCG CCGTGGGAAT TCCGGGTCAG GACACCACAT CGGACCTGCT CCGGCGTGCT
GACCAGGCGG TGCTGACCGC GAAGAACTCC GGCGGTAACC GGGTGACGGT GTTCACCGAG
GAGATGTCGC TGAAGCAGGA GTTCAACAAC GACATCGAAC TGCATCTGCA GAGCGTGATC
GAGAACGGCG CGCTCCTGCT GCACTACCTG CCCGAGATCG ACATGCGCAC CGGCGACATC
CTCGCGATGG AGGCGCTGGT GCGCTGGCAG CACCCGACCC GCGGGCTGTT GTCGCCGGAG
TCGTTCATCG GCGTGGCCGA GTCGATCAAC CTGGCCGGCG AACTGGGCCG CTGGGTGATG
CGTTCGGCGT GCACCGATTT CGCACGCTGG CGCGCGCTGG GTATCGGAAA AGACGCCATC
ATGCGGATCA ACGTCTCACC GGTGCAACTG GTCACCGACG GGTTCGTGGA ATCGGTGGCC
GGCATCGTCG ACGAGTTCGG GCTCGAACAC GGCTCTGTCT GCTTGGAGAT CACCGAAAGC
GTGGTGGTAC AGGACATCGA GACCACCCGC GTCACCCTCA ACGGGCTCAA GAAGGCCGGC
GTGCTGGTCG CCATCGACGA TTTCGGGACC GGGTACAGCG CCCTGTCGCA CCTGAAGTCG
CTGCCCGTCG ACACTCTCAA GATCGACAAG AGCTTCGTGC GCGAACTCGG TTCGGACCCC
GGCGATCTCG CGATCGTGCG GGCGATCATC GCCCTTGCCG AGGCGTTCGG ACTCGAGCTC
GTCGCCGAAG GCGTCGAAAC CGACGTCGGG GCACTCACAC TGCTCCGCCA CGGCTGTCAC
CGCGCTCAGG GCTTCCTGCT GTCGCGTCCG ATTCCGACCG ACGCGATGGA AACGCTGCTG
GCGCAGGGGC GTATCCCGGT CAGCTTCTCG AAGGGCTGA
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| Protein sequence | MSESLDLVVT SVATRLMGAG AATWAEASQQ VLADLVEHFG VDVSFLRRND HTIRASVLVA
EWPVRPGIPD PDPLAVVYFA DADPVFALAE FQKEPLVFRP DANTDEYQKT IEEGRQVPQV
SMAAVPLLSG DVTTGVLGFV KFGDRDWTGV ELNALKAIAS LFAQVQARVE AETQLRYLAE
HDDLTGLNNR RALLSHLDGR LAEGQPGPVS ALFFDLDRLK AINDYLGHTA GDWFIRVLAE
RLREGADPRA LIARLGGDEF VVVPAGPMDG EAAESLAHQL QSTLKERVSI DGEMLTRTVS
IGVAVGIPGQ DTTSDLLRRA DQAVLTAKNS GGNRVTVFTE EMSLKQEFNN DIELHLQSVI
ENGALLLHYL PEIDMRTGDI LAMEALVRWQ HPTRGLLSPE SFIGVAESIN LAGELGRWVM
RSACTDFARW RALGIGKDAI MRINVSPVQL VTDGFVESVA GIVDEFGLEH GSVCLEITES
VVVQDIETTR VTLNGLKKAG VLVAIDDFGT GYSALSHLKS LPVDTLKIDK SFVRELGSDP
GDLAIVRAII ALAEAFGLEL VAEGVETDVG ALTLLRHGCH RAQGFLLSRP IPTDAMETLL
AQGRIPVSFS KG
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