| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4291 |
|---|
| Symbol | |
|---|
| ID | 4975604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 4558528 |
|---|
| End bp | 4559709 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640458518 |
|---|
| Product | geranylgeranyl reductase |
|---|
| Protein accession | YP_001135548 |
|---|
| Protein GI | 145224870 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.464527 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGC GATACGACGT GGTCATCGCA GGTGGAGGGC CCTCGGGGTC GGCCGCCGCA
TGGCAGGCCG CACAGACCGG CGCCAAAGTG GTGGTGCTGG ACAAAGCTCA GTTCCCCCGC
GCCAAACCCT GCGGCGACGG CCTGACGGCG CGTGCCGTCA GCTATCTGCA GAAGATGGGC
CTGGCCGACG AGGTGGCCAC CTATCACCGG GTGAACCGGG TCACGGTGTT CAGCCCCAGC
CGGTGGGAGC TCTCGTTCCC GAAGCGCCCG GGGATGCCCG ACCACGGCCA CACTGTCAGC
CGCGAGCATC TCGACACGGT GCTGCTCAAG CACGCAGAGT CCGCCGGGGC CGAAATCCGC
CAGGGCGCCG AGGTGGCCGG GCCGGAGTTC GACGCCAGTG GACGCGTCGT CGGCGTGATC
CTCAAGAGTG GCGAGAAGGT GCTCGGCGAC GCCGTGATCG CCGCCGACGG CGCGTACTCC
CCTATCAAGC GGGCCCTCAA GATCGACTCG GAATACAACG GCTACTCGGC GATCGCGATC
CGCTCGGAGA TGCCGGCCAA TCGTCCGGAC ACCGATTCGC TGGACATCTA CCTGAAGTTG
TTGTTCGAAG GCGATCAGCT GCCCGGCTAC GGGTGGGTGT TCCCGATGGG CGACGGCATC
TTCAACATCG GACTCGGCTA CGTCAACAGC TACAAGAACT GGCAGTCCAT CAACGCCACC
CAGTTCCTCG GCGAGTTCCT GCGCACGCTC CCGCGCGAGT GGGAGCTTCC GCCCATCGAG
GAGCTTAAGA AGAACAAGAG TGTGCGCGCG TGGCGCCTGC CCATGGGCTT CACCGCATGG
CCGCCCTGGC GTCCCGGCGT GCTGTTCACC GGCGACTCGC TGGGTGCGGG CAAGCCGGCC
TCGGGAGCGG GTATCTCCAA GGCGCTCGAA TCCGGTTTGG CCGCAGGCGA ATGCGCCGTC
GCCGCGCTGA CGAACGGCGG TCCCGACGAC TTCACCAACT ACGCGCTGCG TATGGAGGCC
GCCTGGGGAC GGGAGTACCG CCGCGGTCGC ATCATGCACA AGCTGATCGG GCAGCCGAAG
CTGGCCGAGG CCGGGGTGAA GCTGATCGAC AACGCCGCGT TCCGTGACCG GATGCTTAAG
GCGCTGTACA AGAAGGCCCA GGGTCCGCAG CACAGCTTCT GA
|
|---|
| Protein sequence | MTQRYDVVIA GGGPSGSAAA WQAAQTGAKV VVLDKAQFPR AKPCGDGLTA RAVSYLQKMG
LADEVATYHR VNRVTVFSPS RWELSFPKRP GMPDHGHTVS REHLDTVLLK HAESAGAEIR
QGAEVAGPEF DASGRVVGVI LKSGEKVLGD AVIAADGAYS PIKRALKIDS EYNGYSAIAI
RSEMPANRPD TDSLDIYLKL LFEGDQLPGY GWVFPMGDGI FNIGLGYVNS YKNWQSINAT
QFLGEFLRTL PREWELPPIE ELKKNKSVRA WRLPMGFTAW PPWRPGVLFT GDSLGAGKPA
SGAGISKALE SGLAAGECAV AALTNGGPDD FTNYALRMEA AWGREYRRGR IMHKLIGQPK
LAEAGVKLID NAAFRDRMLK ALYKKAQGPQ HSF
|
|---|
| |