Gene Mflv_4230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4230 
Symbol 
ID4976657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4489621 
End bp4490409 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID640458457 
Product5-carboxymethyl-2-hydroxymuconate Delta-isomerase 
Protein accessionYP_001135487 
Protein GI145224809 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.270063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCG GTCGAATCGC CAGCCCAGAT GGAGTCGCCT TCGTCGCCGT CGAAGGCCCG 
CCCGACGACC CGGCCGCCGC GGTCGCCCGC GAGATCGCGG AGCATCCGTT CGGTACCCCG
ACGTTCACCG GCCGGCAGTG GCCACTCGCC GACGTCCGAC TGCTCGCACC GATCCTCGCC
AGCAAGGTGG TGTGCATGGG AAAGAACTAT GCCGCCCATA TCGAGGAGAT GGGCGGAGGG
ACCTTCGAAG ACCCGATCAT CTTCCTCAAG CCCAACACCG CGATCATCGG GCCCTACACG
CCGATCCAGC TTCCCGCCGA TGCCGACCCG GTGCATTTCG AGGGGGAGCT CGCGGCCGTG
ATCGGGCGGC CCTGCAAGGA CGTTCCGGCG TCGCGGGCCG CCGAGAACAT CCTCGGGTAC
ACGATCGCCA ACGACGTGTC GGCCCGTGAC CAGCAGAAGA AGGACGGCCA GTGGATGCGT
GCCAAGGGGC ACGACACCTT CTGCCCCGTG GGCCCGTGGA TCGTCACCGA CATCGACCCC
TCCGACCTGG AGATCCGTAC GGAGGTCAAC GGCGAGCTCA AGCAGCACAG CCGAACGTCG
CTGATGATCC ACGACATCGG CGCGATCATC GAATGGATCT CGTCGGTGAT GACCCTGCTG
CCGGGCGACC TGATCCTGAC GGGCACACCG GAGGGCGTCG GTCCGCTCGA GCACGGCGAC
ACCGTCAGCA TCACCGTCGA AGGTATCGGA ACACTGAGCA ATCCTGTTGT GCGGAAAGGC
AAGTCGTGA
 
Protein sequence
MRLGRIASPD GVAFVAVEGP PDDPAAAVAR EIAEHPFGTP TFTGRQWPLA DVRLLAPILA 
SKVVCMGKNY AAHIEEMGGG TFEDPIIFLK PNTAIIGPYT PIQLPADADP VHFEGELAAV
IGRPCKDVPA SRAAENILGY TIANDVSARD QQKKDGQWMR AKGHDTFCPV GPWIVTDIDP
SDLEIRTEVN GELKQHSRTS LMIHDIGAII EWISSVMTLL PGDLILTGTP EGVGPLEHGD
TVSITVEGIG TLSNPVVRKG KS