| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4188 |
|---|
| Symbol | |
|---|
| ID | 4975501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 4443907 |
|---|
| End bp | 4447491 |
|---|
| Gene Length | 3585 bp |
|---|
| Protein Length | 1194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640458413 |
|---|
| Product | chromosome segregation protein SMC |
|---|
| Protein accession | YP_001135445 |
|---|
| Protein GI | 145224767 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.269339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.69068 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCTGA AGAGTCTGAC GCTGAAGGGC TTCAAGTCCT TCGCCTCGCC GACGACTCTT
CGCTTCGAAC CGGGGATCAC CTGTGTGGTC GGGCCCAACG GCTCGGGCAA GTCCAATGTC
GTCGACGCGC TGACCTGGGT GATGGGCGAG CAGGGGGCCA AGACGCTGCG CGGCGGCAAG
ATGGAGGACG TCATCTTCGC CGGCACGTCG TCGCGGGCCC CGCTGGGCCG CGCCGAGGTC
ACGCTGACGA TCGACAACTC CGACAACGCG CTGCCCATCG AGTACTCCGA GGTGTCGATC
ACCCGGCGCA TGTTCCGCGA CGGGGCGGGG GAGTACGAGA TCAACGGCAG CCGTTGCCGT
TTGGCCGATG TCCAGGAGCT GCTGAGCGAT TCCGGCATCG GCCGGGAGAT GCACGTGATC
GTCGGCCAGG GCAAGCTCTC GGAGATCCTG GAATCCCGTC CGGAGGACCG CCGTGCGTTC
ATCGAGGAGG CCGCCGGCGT CCTCAAGCAC CGCAAGCGCA AGGAAAAGGC GGTCCGCAAG
CTCGACTCGA TGGCAGCCAA CCTGGCGCGG CTGACCGACC TGACCACCGA GCTGCGCCGC
CAGCTCAAGC CGCTGGGCCG CCAGGCCGAG ATGGCCCGGC GCGCCCAGAC CATCCAGGCC
GACCTGCGCG ATGCCCGGCT GCGGCTGGCC GCCGACGACC TGGTGGCCCG CAAGGCCGAG
TTCGACGACA CCGATCAGGC CGAGACCACC CTGCGCCGCG AGCACGACGA GCTCACCGAG
CGGCTGCAGG AGCGGGCGGC CGAGCTCGAC GCCCACGAGA CCGCGGTCGA GGACCTCAGC
GAACGGGCCG ACGCCGCCCA ACAGCGCTGG TTCCGGCTTT CCGCCCTCGC CGAACGGGTC
AGCGCGACGG TCCGGATCGC CAGCGAGCGT GCCCAGCACC TCGACGGGGA CCCGGATTTC
TCGGCGGGAC CCGATCCCGA CGAGCTCGAA GCGCAGGCCG ACGCCGTCGC CGAACAGGAA
CAGCAGCTGC TCGACGAGCT CGCCGAATCC CAGGAGCGTC TGGAGGCGGC CCGTGAGGAA
CTCGCCGAAC GCGAGCAGGC AGCCGCCGAG GCCGAGCGCG CCCACATGGC CGCGGCCCGC
GCCGAGGCCG ACCGGCGCGA GGGGCTCGCC CGGCTGTCCG GCCAGGTCGA CACCATGCGC
ACCCGCGTCG AATCCGTCGA CGAGACCGTG GCCCGTCTCA CCGCGAACAT CGACGACGCC
GCCGCCCGCG CCCAGCTGAC GCAGGCCGAG TTCGAGACGG TGCAGGCCCG GGTCGGTGAG
CTCGACGCCG GTGAGGTCGG CCTCGACGAA CACCACGATC GCAGCGTGGC GGCACTGCGG
CTGGCCGACG AACGCGTCGC CGAACTGCTC GCCGCCGAGC GGGCCGCGGA ACGTCAGGTC
GCTTCTTTGC AGGCACGGAT CGATGCGCTG TCGGTCGGGC TCGACCGTCG CGACGGAGCG
GCATGGCTTC AGGAGAACCA CAGCGGTGCC GGACTTTTCG GCTCCATCGC GAACCTGGTC
AAGGTGCGGG CCGGCCACGA GGCGGCCATC GCGGCGATGC TGGGCGCCGC CGCGGACGCG
CTGGCCGCCG AGGACTTCGG TGCCGCGCGC GCAGCGGTGG CCGCGCTGAA GGAGTCGGAC
GGCGGCCGGG CCGCGCTGGT GCTGGGGGAC TGGCCGGCTC AGGAGGCGGT GACGGGTCAG
CTGCCCGCCG GCGCCGCATG GGCGGTCGAC CTCGTCGAGC CCGCGGACCG GGTGCGCGGC
GCCGTCACCG CGATGCTGTC CGGGGTCGCA GTGGTCGAAA ACCTGACCGC GGCACTGGAT
CTCGTTGCCG CGCAACCCAG GTTGCGCGCT GTGACCGCCG ACGGCGACCT GGTGGGCGCC
GGCTGGGTCA GCGGTGGGTC GGACCGCAAA CCGAGCACCC TGGAGATCCA GTCAGAGGTC
GACAGGGCCC GTTCGGAGTT GGTCGACGCG GAGCGGCGGA CCGGGGAGTT GTCGGCGGCC
CTGTCCGGAG CGCTGGCAGA ACAGGCCGCG CGTCAGGATG CCGCGGAGCA CGCCCTGGCC
GCGCTGAACG AATCCGACGC GGCGATCTCG GCGATCTACG AGCAGCTCGG CCGGCTCGGG
CAGGATGCGC GAGCGGCCGA CGACGAATGG CAGCGCCTCA TCAGGCAGCG CGACGAGATG
GAGGCCGGAC GCAACCGCAC CGTCTCGGAG CTGGCCGAGC TCGAGCTGCG GCTGCAGAAC
GCGCAGCGGG AGCCGATGTT CGACGCCGAG GTCGTCGACC GGACGGAGTT CACCGCCGCC
GCCGAGGCGG CCCGATCCGC GGAGGTGGAG GCGCGGCTGT CCGTGCGCAC CGCCGAGGAA
CGCGCCAATG CCGTTCGGGG CCGGGCGGAT TCGCTGCGCC GCGCCGCGGT GGCCGAGCGC
GAGGCGCGGG TGCGCGCGCA ACGTGCCCGG GAGGCGCGCG TGCATGCCGC GGCCGTCGCA
GCCGCGGTCG CCGAGTCGGG GCGGGCCGTC GCGCAGCGAC TCGCCGACGC GGTGTCGGTC
GCCTCGCGGA TCAGGGACGA GGTCGCCGCG GAGCGTCAGG TGCGTGCCGG CGCGCTGACG
AAGGCGCGCG AGGAGGTCAA CGAACTCACC GCGCGGATCA CCGCCCTGAC CGACGCGCTG
CACCGTGACG AAGTCGCCAA AGCCCAAGCG GCACTTCGCA TCGAGCAGCT CGAGCAACAG
GTCCTGGAGC AGTTCGGCAT GGCCGTGGCC GATCTCGTCG CCGAGTACGG GCCCGACGTC
GCCCTGCCGC CCTCGGAGCT GGAGATGGCC GAGTACGAGC AGGCCAGGGA GCGCGGCGAG
CAGGTCACCG CGCCCGCGCC GATGCCGTAC GACCGGCCCA CCCAGGAGCG GCGGGCCAAG
CGTGCCGAGC GGGAACTCAA AGAGCTGGGA CGGGTGAATC CTCTTGCGCT GGAAGAGTTC
GCGGCGCTGG AGGAGCGCTA CAACTTCCTG TCGACCCAAC TCGAGGACGT CAAAGCCGCC
CGCAAGGATC TGCTCGACGT GATCGCCGAG GTCGACACCC GCATCCTGCA GGTCTTCACC
GAGGCCTACA TGGATGTGGA GCGGGAGTTC ACGCAGGTGT TCTCGACGCT GTTCCCCGGT
GGTGAGGGAC GGCTGCTGCT GACCAACCCG TCGGACATGC TGACCACCGG TATCGAGGTC
GAGGCCCGTC CGCCCGGTAA GAAGATCAAG CGGCTCTCGC TGCTCTCGGG CGGGGAGAAG
TCGCTGACGG CGGTGGCGAT GCTGGTCGCG ATCTTCCGTG CGCGGCCCTC ACCGTTCTAC
GTGATGGACG AGGTCGAGGC GGCGCTCGAC GACGTGAACC TGCGCCGGCT GATCAGCCTG
TTCGAGCAGC TCCGTGAGCG ATCGCAGTTG ATCGTGATCA CCCACCAGAA GCCGACGATG
GAGGTCGCCG ACGCGTTGTA CGGCGTCACC ATGCAGGGCG ACGGCATCAC GACGGTGATC
TCGCAGCGGA TGCGGGGTCA GGAACTGGTC ACCAGCTCGT CCTGA
|
|---|
| Protein sequence | MHLKSLTLKG FKSFASPTTL RFEPGITCVV GPNGSGKSNV VDALTWVMGE QGAKTLRGGK
MEDVIFAGTS SRAPLGRAEV TLTIDNSDNA LPIEYSEVSI TRRMFRDGAG EYEINGSRCR
LADVQELLSD SGIGREMHVI VGQGKLSEIL ESRPEDRRAF IEEAAGVLKH RKRKEKAVRK
LDSMAANLAR LTDLTTELRR QLKPLGRQAE MARRAQTIQA DLRDARLRLA ADDLVARKAE
FDDTDQAETT LRREHDELTE RLQERAAELD AHETAVEDLS ERADAAQQRW FRLSALAERV
SATVRIASER AQHLDGDPDF SAGPDPDELE AQADAVAEQE QQLLDELAES QERLEAAREE
LAEREQAAAE AERAHMAAAR AEADRREGLA RLSGQVDTMR TRVESVDETV ARLTANIDDA
AARAQLTQAE FETVQARVGE LDAGEVGLDE HHDRSVAALR LADERVAELL AAERAAERQV
ASLQARIDAL SVGLDRRDGA AWLQENHSGA GLFGSIANLV KVRAGHEAAI AAMLGAAADA
LAAEDFGAAR AAVAALKESD GGRAALVLGD WPAQEAVTGQ LPAGAAWAVD LVEPADRVRG
AVTAMLSGVA VVENLTAALD LVAAQPRLRA VTADGDLVGA GWVSGGSDRK PSTLEIQSEV
DRARSELVDA ERRTGELSAA LSGALAEQAA RQDAAEHALA ALNESDAAIS AIYEQLGRLG
QDARAADDEW QRLIRQRDEM EAGRNRTVSE LAELELRLQN AQREPMFDAE VVDRTEFTAA
AEAARSAEVE ARLSVRTAEE RANAVRGRAD SLRRAAVAER EARVRAQRAR EARVHAAAVA
AAVAESGRAV AQRLADAVSV ASRIRDEVAA ERQVRAGALT KAREEVNELT ARITALTDAL
HRDEVAKAQA ALRIEQLEQQ VLEQFGMAVA DLVAEYGPDV ALPPSELEMA EYEQARERGE
QVTAPAPMPY DRPTQERRAK RAERELKELG RVNPLALEEF AALEERYNFL STQLEDVKAA
RKDLLDVIAE VDTRILQVFT EAYMDVEREF TQVFSTLFPG GEGRLLLTNP SDMLTTGIEV
EARPPGKKIK RLSLLSGGEK SLTAVAMLVA IFRARPSPFY VMDEVEAALD DVNLRRLISL
FEQLRERSQL IVITHQKPTM EVADALYGVT MQGDGITTVI SQRMRGQELV TSSS
|
|---|
| |