Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_4105 |
Symbol | |
ID | 4975419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 4357072 |
End bp | 4357836 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640458331 |
Product | HpcH/HpaI aldolase |
Protein accession | YP_001135363 |
Protein GI | 145224685 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00950461 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.23026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGTC GACTGCAGCA GGCGCTCTCA TCCGGAGGGC CGGTGTGGGG AGGCTGGGTG GTGGGCCCGA CCGTGATCGG GCCCGAGGAA TACGCCGCCG CCGGGTACGA CTACGTCGGA ATCGACGTCC AGCACAGCTA TCTCAGCGAC GCCGACGTCG CGCTGATGCT CCGCCGTCTC GAGCACGTGC CGATCGCCAC GGTGGTGCGA CTGCCCGATG CGGCGCCCGC GCCGATCGGC AGGGTGCTCG ACGCCGGCGC GGACGGCGTG ATCATCGCGA TGGTCGAGTC CGCAGCGGAC GCCGCCGCCG CGGTCGCGGC CACCCGGTAC GCCCCCGGCG GTGTCCGCAG CTTCGGTCCG TTGCGCGCAA GCCTCGGGCT GGACCCGTCG GCGCTGCAGG AGCGGGCGTC GGTGTTCGCG ATGATCGAGA CGACGCGCGG ACTCGCCGCC GTGGACGAGA TCTGCCGGGT CGACGGACTG ACGGGGATCT ACGTGGGGCC AGCGGATCTG GCGATCTCGA TGGGACACGG ACCGACCGAC GCGTGGTCGC GCCGCGATGT GTTCGACGTC ATCCTGACCG CCCAGCGCGC CGCAGCCGCC GCCGGTGTGG TCAGCGGCAT CCACGCCAGT GCCGGTTCCG CCGGTAACAT GCTGGCGCAG AACGGATTCC AGATGATCAC GCTCGCCTCG GAGTCGCAGG CGTTGCGCCG GGGCGCGGCC GCACATCTGT CCGACGCGCG AGGGGAGTCC GGCGATGGCC GCTGA
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Protein sequence | MTSRLQQALS SGGPVWGGWV VGPTVIGPEE YAAAGYDYVG IDVQHSYLSD ADVALMLRRL EHVPIATVVR LPDAAPAPIG RVLDAGADGV IIAMVESAAD AAAAVAATRY APGGVRSFGP LRASLGLDPS ALQERASVFA MIETTRGLAA VDEICRVDGL TGIYVGPADL AISMGHGPTD AWSRRDVFDV ILTAQRAAAA AGVVSGIHAS AGSAGNMLAQ NGFQMITLAS ESQALRRGAA AHLSDARGES GDGR
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