Gene Mflv_4086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4086 
Symbol 
ID4975400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4338887 
End bp4340236 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content70% 
IMG OID640458312 
Productdeoxyribodipyrimidine photo-lyase 
Protein accessionYP_001135344 
Protein GI145224666 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.703366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.759953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCG TGTTGTGGTT CCGCCGCGAT CTGCGGCTGG CCGACCTGCC CGCTCTGGTG 
GCCGCCGCGG AGGTCGACGG CGACGTGCTC GCCTGCTACG TCCTCGACCC GCGGCTGAAG
GCGACGGGAG GTTCGCGCCG GCTGCAGTAC CTCTACGACG CCCTGCGCGA TCTGCGCGAA
TCACTCGACG GTCGGCTGCT GATCACCCGC GGCGATCCGG TCTCCCGGAT TCCGGTGCTG
GCCGCGGCCG TCGGCGCGTC GTCGGTGCAC GTCTCGGAGG ACTTCACACC GTTCGGCATG
CGCCGCGACG AGCAGGTCCG AGACGCGCTG GGCGACGTGG AGCTGGTGGC GACGGGCTCG
CCGTATCTGG TGTCACCGGG CCGCGTCACC AAGGGTGACG GCTCGCCCTA CAAGGTCTTC
ACACCGTTCT TCGACGCGTG GCGTCAGCAC GGGTGGCGCC CGCCGGCGGA ATCGGGACCC
CCGTCCGCGC ACTGGCTCGA CCCCGCCGAC GTTGCGGGCA AACCCGGAAT CACCGACATC
CCCGACGCCG GGGTCGAACT CGACCTGCCC GCCGGGGAGA CGGCCGCCCG CCGGCAGTGG
AAACAATTCG TCGACGACGG GTTGGCCGGC TACGCCGAGG ACCGCAACCG TCCGGACCTC
GCCGCGACCA GCCGGATGTC GGCGCATCTG AAGTTCGGCA CCATCCACCC GCGCACCCTC
GCGGCGGATC TCGGCCGGGG CAAGGGCGCC CAGGCGTATC TGCGTGAGCT GGCGTTCCGC
GACTTCTATG CGGCGGTGGT GGCGGAGTGG CCGCGCAGCA CGTGGTGGAA CTGGAACTCC
ACCTTCGACG CCATCGAGGT CGACGACGGG CCCGACGCAC AGCGGGCGTT CGAGGCGTGG
AAAGCGGGGA GGACGGGATT CCCCATCGTC GATGCCGGGA TGCGTCAGCT GGCCGAGACC
GGGTTCGTGC ACAACCGGGT CCGCATGATC GTCGCGTCGT TCCTGGTCAA GGATCTCCAC
CTGCCGTGGC AGTGGGGTGC GCGCTGGTTC CTCGATCAGC TCACCGACGG CGACATGGCG
AACAATCAGC ACGGTTGGCA GTGGGCCGCG GGGTGCGGCA CCGACGCCGC ACCGTACTTC
CGCGTGTTCA ACCCGACCAC CCAGGGCAAG AAGTTCGATC CGGCCGGGGT GTATGTGAAG
CGCTGGGTCG AAGAGCTCCG CGACGTTGCC AGTTCTGTCG ACGTCCACAA CCTGGACCGT
GACCGGCCCG CCGACTATCC CGAGCCGATC GTCGACCACG CGCAGGAGCG CGCCGAGGCG
CTGCGGCGCT ACAACTCGCT GCGGGGCTGA
 
Protein sequence
MPAVLWFRRD LRLADLPALV AAAEVDGDVL ACYVLDPRLK ATGGSRRLQY LYDALRDLRE 
SLDGRLLITR GDPVSRIPVL AAAVGASSVH VSEDFTPFGM RRDEQVRDAL GDVELVATGS
PYLVSPGRVT KGDGSPYKVF TPFFDAWRQH GWRPPAESGP PSAHWLDPAD VAGKPGITDI
PDAGVELDLP AGETAARRQW KQFVDDGLAG YAEDRNRPDL AATSRMSAHL KFGTIHPRTL
AADLGRGKGA QAYLRELAFR DFYAAVVAEW PRSTWWNWNS TFDAIEVDDG PDAQRAFEAW
KAGRTGFPIV DAGMRQLAET GFVHNRVRMI VASFLVKDLH LPWQWGARWF LDQLTDGDMA
NNQHGWQWAA GCGTDAAPYF RVFNPTTQGK KFDPAGVYVK RWVEELRDVA SSVDVHNLDR
DRPADYPEPI VDHAQERAEA LRRYNSLRG