Gene Mflv_4085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4085 
Symbol 
ID4975399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4338155 
End bp4338739 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content67% 
IMG OID640458311 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_001135343 
Protein GI145224665 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.771867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.954365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA TGATGAAATC ATTCGCCGGG GCGGGGCTGG CCGTCACGGC CGCACTCGGG 
CTGTCGTTCG CCACCGCGAC GACGGCGTCG GCCGCACCGG CCGGCCCGGG ATGTGCCGCC
TACGTGCAGC AGGTTCCCGA AGGTCCGGGT TCCGTGCAGG GTATGGCGAT GGACCCGGTG
GCGACCGCGG CATCGAACAA CCCGCTGCTG ACGACGCTCA CGAAAGCCGT GTCCGGCCAA
CTGAATCCGA ACGTCAACCT CGTCGACACG CTCAACGGCG CGGAGTTCAC CGTGTTCGCC
CCGACCGATG AGGCGTTCGC CAAGCTGGAC CCGGCGACCG TCGAGACGCT CAAGACGGAC
AGCAACCTGC TGACGAACAT CCTGACCTAC CACGTGGTTC CGGGTCAGGC TGCGCCCGAT
CAGGTCGTCG GTGAGCACGT CACCGTTCAG GGAGCGACGG TGAACGTCAC CGGCGCACCG
GATCACCTCA TGGTCAACGA CGCCTCGGTG GCCTGCGGCG GAGTGCAGAC CGCGAACGCG
ACGGTGTACC TGATCGACAC CGTGCTGATG CCGCCTGCGA TGTAG
 
Protein sequence
MTIMMKSFAG AGLAVTAALG LSFATATTAS AAPAGPGCAA YVQQVPEGPG SVQGMAMDPV 
ATAASNNPLL TTLTKAVSGQ LNPNVNLVDT LNGAEFTVFA PTDEAFAKLD PATVETLKTD
SNLLTNILTY HVVPGQAAPD QVVGEHVTVQ GATVNVTGAP DHLMVNDASV ACGGVQTANA
TVYLIDTVLM PPAM