Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_4078 |
Symbol | |
ID | 4975392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 4331019 |
End bp | 4332023 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640458304 |
Product | integrase catalytic subunit |
Protein accession | YP_001135336 |
Protein GI | 145224658 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.461367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACCGCGG CGATCGGTTC GCAACGTCAG GCGCTGGCGA TGATCGATCT GTCGCGTTCG ACGTGGCATT ACCGGACCAA CCCGCGCCCG CCGGTCAGCG ACCCGCTGCC GCAGAAGCAT CGGGCTTACC CATCGCGCAT CGATGAGGCC GACCGGGCAG TGATCCGAGA CAAGATCCTC GCCGGCTGGG AGGCGGGCAG CTCGGTGGAC CATGCGTTCG CCGCCAGCTG GGACGAGGGC GTGATGTTGG CCTCGCGGCG TTCCTGGTGG CGGATCGCCG CCGCGATCGA GGACCAAAGT GCGCGCCCAG TCGCACCGAC CCGCTCGACG AGCAAGACGC CCCGGCAGGC GCCGGTACTC AAAGCGACAG GACCACAACA GATCTGGAGT TGGGACATCA CCGACCTGCG CAGCCCGTGG CGCGGTGTGG CGTTCAAGGC GTACTCGATC CTTGACATCT ACTCCCGCAA GATCGTGGGC TGGCGCGTGG AGGAACGGGA ATGCGACGAC CTCGCCGTGG ACATGTTCGA AGCCGCGTTC GCCGGGCACG GCCTACCCGC GGTCGTGCAC GCCGATTCCG GGCCGGCGAT GCGCTCGACG GTCCTCAAAG ACCTCCTGGC CGGTCTCAAG ATTGGCCAAA CCCATAACCG GCCCCGGGTC AGCAATGACA ACCCGTTCTC CGAATCGGAG TTCCGCACGA TGAAGTACCG ACCGAACTAT CCCGGTGTCT TCACAGATCT TGACTCCGCC CGCGCCTGGG TGAGCGCCTA CGTGTCCTGG TACAACCAGC ATCACCGCCA CAGCGGCGTC GAACTGTTCA CCCCAGACTC CGTCCACGAC GGCACGTGGG CGCAGCTCTG GGACCGACGA GACACCGCCC TACAGGCCTA CTACGACGCT CACCCCGAAC GGTTCCGCAA CCGTCCACGA ACCAAAAGCC CCAGCCCCGT CGTCGGCATC AACCTCCCCA CCGAAAACGA CCCCGACCGA CTCCAAGCAG CTTGA
|
Protein sequence | MTAAIGSQRQ ALAMIDLSRS TWHYRTNPRP PVSDPLPQKH RAYPSRIDEA DRAVIRDKIL AGWEAGSSVD HAFAASWDEG VMLASRRSWW RIAAAIEDQS ARPVAPTRST SKTPRQAPVL KATGPQQIWS WDITDLRSPW RGVAFKAYSI LDIYSRKIVG WRVEERECDD LAVDMFEAAF AGHGLPAVVH ADSGPAMRST VLKDLLAGLK IGQTHNRPRV SNDNPFSESE FRTMKYRPNY PGVFTDLDSA RAWVSAYVSW YNQHHRHSGV ELFTPDSVHD GTWAQLWDRR DTALQAYYDA HPERFRNRPR TKSPSPVVGI NLPTENDPDR LQAA
|
| |