| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4052 |
|---|
| Symbol | |
|---|
| ID | 4975366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 4305489 |
|---|
| End bp | 4307045 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640458278 |
|---|
| Product | malate:quinone oxidoreductase |
|---|
| Protein accession | YP_001135310 |
|---|
| Protein GI | 145224632 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0579] Predicted dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01320] malate:quinone-oxidoreductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCAGAAG CAGAGAAGAC CGACGTCCTG CTCGTCGGCG CCGGCATCAT GAGCGCCACC
CTGTGCGCGC TACTGCGGCT GTTGGAACCG AACTGGTCGA TGACGCTGGT CGAGCGCCTC
GACGGCGCGG CGGCCGAGAG CAGCGACCCG TGGAACAACG CCGGTACCGG CCACTCGGCG
CTGTGTGAGC TCAACTACAC GCCGGCGCGG CCCGACGGCT CCATCGACAT CGCCAAAGCG
GTCAACGTCA ACGAACAGTT CCAGGTGTCG CGCCAGTTCT GGACCTACGC CGTCGAGAAC
GGCGTGCTGC CCGACGTCCG CAGCTTCCTC AACCCGATCC CGCACGTCAG CTTCGTGACC
GGGGCCGACA ACGTGCAGTA CCTGCGCAAG CGCTACGAGG CGCTCGTCGG CAACCCGCTG
TTCGGCACGA TGGAGTTCAT CGACGACGCC GGCGAGTTCG CCCGCCGCCT GCCGCTGATG
GCAGAGGGTC GCGACCTGCG CGAGCCCGTC GGTTTGAACT GGACCCAGGA CGGCACCGAC
GTCGACTTCG GCGCGTTGTC ACGCCAGCTC CTCGGCTTCG GCGCCCAGCA GGGCATGGAC
ACCCTGTTCG GCCACGACGT CACCAACCTC AGCCAGAACT CCGACAGCAC GTGGACGGTC
AAGGTCGTCA ACCGCCGGAC CGGCCGCAAG CGGACGTTCA ACGCGAAGTT CGTGTTTGTC
GGCGCCGGCG GCGGAGCCCT GCCGCTGCTG CAGAAGGCGG GCATCAAGGA GGCCAAGGGA
TTCGGCGGAT TCCCGGTCGG CGGCCAATGG CTGCGCACCG GCAATCCCGA GCTCACTGCG
AAGCACCAGG CGAAGGTCTA CGGACTGCCG CCGCTGGGCG CGCCGCCGAT GTCGGTGCCG
CACCTCGACA CCCGGGTGAT CAACGACAAG TCGTGGCTGC TGTTCGGTCC GTTCGCCGGC
TGGTCGCCGA AGTTCCTCAA GCAGGGCAAG GTCACCGACC TGCCGTTCTC GGTGAAGCCC
GACAATCTCG TGTCGATGCT CGGCGTCGGG CTCACAGAGA TGGGTCTGCT GAAGTACCTG
ATCGGGCAAC TGCTGCTCAG CGAGGCCGCC CGCGTCGAGA ATCTGCGTGA GTTCGCGCCC
AGCGCAAAGG ATTCCGACTG GGAGCTCGAC ATCGCCGGTC AGCGCGTGCA GGTGATCCGC
AAGGCCAAGG GCAAGGGCGG CGTGCTGGAG TTCGGCACCA CGGTGCTCTC GGCCGCCGAC
GGCAGCATCG CGGGCCTGCT CGGTGCGTCC CCGGGTGCGT CGACGGCTGT GCCGGCGATG
TTCGACGTGA TGAAACGCTG CTTCGCCGAC CGTTACCCGA GCTGGGAGCC CAAGCTCAAG
GAGATGGTCC CGTCGCTGGG CGTCACGCTG TCCGACGAGC CGAAGCTGTT CGAGGAGGTG
TGGGCGCGCG GCACGAAGGT GCTCAAGCTC GACAAGCCCG CCGGGGCGAT ACCGGCCACC
ACGGACGGCC AGTCGACGGC GGGCACCGAA CACACTCCGA CAGCGGCGAC CGTTTGA
|
|---|
| Protein sequence | MSEAEKTDVL LVGAGIMSAT LCALLRLLEP NWSMTLVERL DGAAAESSDP WNNAGTGHSA
LCELNYTPAR PDGSIDIAKA VNVNEQFQVS RQFWTYAVEN GVLPDVRSFL NPIPHVSFVT
GADNVQYLRK RYEALVGNPL FGTMEFIDDA GEFARRLPLM AEGRDLREPV GLNWTQDGTD
VDFGALSRQL LGFGAQQGMD TLFGHDVTNL SQNSDSTWTV KVVNRRTGRK RTFNAKFVFV
GAGGGALPLL QKAGIKEAKG FGGFPVGGQW LRTGNPELTA KHQAKVYGLP PLGAPPMSVP
HLDTRVINDK SWLLFGPFAG WSPKFLKQGK VTDLPFSVKP DNLVSMLGVG LTEMGLLKYL
IGQLLLSEAA RVENLREFAP SAKDSDWELD IAGQRVQVIR KAKGKGGVLE FGTTVLSAAD
GSIAGLLGAS PGASTAVPAM FDVMKRCFAD RYPSWEPKLK EMVPSLGVTL SDEPKLFEEV
WARGTKVLKL DKPAGAIPAT TDGQSTAGTE HTPTAATV
|
|---|
| |