Gene Mflv_4000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4000 
Symbol 
ID4975315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4256735 
End bp4257643 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content70% 
IMG OID640458227 
Productdihydrodipicolinate synthase 
Protein accessionYP_001135259 
Protein GI145224581 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.104008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTGA GTACCAGCGG ATTCGACGCC CCAGCCCGGT TGGGCACCTT GTTGACCGCG 
ATGGCGACTC CGTTCAAGCC CGACGGCTCG CTGGACATCG AGACGGCGGC CCGGCTGGCC
ACCCGCCTGG TCGACGCCGG CTGCGACGGT CTGGTCGTCT CCGGCACCAC GGGCGAGTCG
CCGACCACGA CCGACGACGA GAAGATCCTG CTGCTGCGCA CGGTGTTGGA GGCGGTCGGT
GACCGGGCCC GCATCGTCGC AGGCGCCGGC ACCTACGACA CCGCCCACAG TATCCACCTC
GCCAAGGCCA GCGCCGCCGA AGGCGCGCAC GGCCTGCTCG TCGTGACGCC GTACTACTCG
CGGCCCCCGC AGGCGGGCCT CGTCGCACAC TTCACCGCCG TCGCCGACGC GACCGACCTG
CCGAACATCC TGTACGACAT CCCGCCACGC TCGGTGGTGC CGATCGAATG GGACACCATC
CGTCGCCTGG CGCAGCACCC CAACATCGTC GCGATCAAGG ACGCCAAAGC CGACCTGCAC
GGCGGAGGCC AGATCATCGC CGAGACCGGG CTGGCCTACT ACTCGGGCGA CGACGCGCTG
AACCTGCCGT GGCTGGCCAT GGGAGCGGTC GGTTTCATCA GCGTGTGGGG CCATCTGGCA
GCCAGTCAGC TGCGAGACAT GTTGAGCGCC TTCGCTTCCG GGGACGTAGC GACGGCCCGC
AAGATCAACG TCGCGCTCGG CCCGCTCAGT GCGGCGCAGT CGCGTCTGGG GGGAGTGACG
CTGTCGAAAG CCGGGCTGCG TCTGCAGGGT TTCGAGGTGG GCGATCCGCG GCTGCCGCAG
ATCCCCGCGA ACGACGTGCA GCTGCAGGCG CTCGCTGCGG ACATGCGCGC TGCGTCGGTG
CTGAGGTAG
 
Protein sequence
MPVSTSGFDA PARLGTLLTA MATPFKPDGS LDIETAARLA TRLVDAGCDG LVVSGTTGES 
PTTTDDEKIL LLRTVLEAVG DRARIVAGAG TYDTAHSIHL AKASAAEGAH GLLVVTPYYS
RPPQAGLVAH FTAVADATDL PNILYDIPPR SVVPIEWDTI RRLAQHPNIV AIKDAKADLH
GGGQIIAETG LAYYSGDDAL NLPWLAMGAV GFISVWGHLA ASQLRDMLSA FASGDVATAR
KINVALGPLS AAQSRLGGVT LSKAGLRLQG FEVGDPRLPQ IPANDVQLQA LAADMRAASV
LR