Gene Mflv_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3996 
Symbol 
ID4975311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4252080 
End bp4252898 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content68% 
IMG OID640458223 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001135255 
Protein GI145224577 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.783796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.195478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC TCACCGGCAA GGTCGCGTTC ATCACCGGCG CCGCCCGGGG CCAGGGCCGC 
GCGCACGCGG TCAAGCTCGC CTCCGAGGGC GCCGACATCA TCGCGCTCGA CCTGTGCGCG
CAGATCGACT CGGTCCCCTA TCCGCTGGCG ACCCCCGACG ACATGGCCGC CACGGTCAAG
CTCGTCGAGG AGGCCGGCGG GCGCATCGCG ACATATGAGG CCGACGTCCG CGACCGCGAC
GCGGTCAAGG CCGTGGTGCG CGACGGCACC GAGAAGTTCG GCGATCGGCT CGACATCGTC
ATCGCGAACG CGGGCATCGC GCCGATGGCC GCGGCCGACG CGTGGCAGGA CGTCATCGAC
GTCAACCTGA CCGGGGTCTA CAACACCATC GACGTCGCGA TGAAACCGAT GGTGAAGTTC
GGCAACGGCG GCGCGATCGT GCTGACCAGT TCGGTCGCCG GGCTTGTCGG CATCGGTGCG
CCGCTGGGCG GTTCGGTGGG GTATGCCGCG GCCAAGCACG GCATCGTCGG GATCATGCGG
GTGTACGCGA ATTTCCTCGC CCAGTACAGC ATTCGCGTCA ACTCGGTGCA TCCGGCCGGG
GTCAACACCC CGATGATCGA CAACGACTTC ACCCGGTCCT GGCTCGACGG TATGGCTCAG
CAGAGCCAGG GCGGGCCGGA CATGGGCAAC GCGCTGCCGG TGCAGACGCT CGAGCCCGAG
GACATCGCGA ACGCGGTGTA CTGGCTGGTC TCCGACGCCG CCCGCTACGT CACGGGAATC
ACGCTGCCGG TCGACGCCGG GTTCGTCAAC AAACGATGA
 
Protein sequence
MAELTGKVAF ITGAARGQGR AHAVKLASEG ADIIALDLCA QIDSVPYPLA TPDDMAATVK 
LVEEAGGRIA TYEADVRDRD AVKAVVRDGT EKFGDRLDIV IANAGIAPMA AADAWQDVID
VNLTGVYNTI DVAMKPMVKF GNGGAIVLTS SVAGLVGIGA PLGGSVGYAA AKHGIVGIMR
VYANFLAQYS IRVNSVHPAG VNTPMIDNDF TRSWLDGMAQ QSQGGPDMGN ALPVQTLEPE
DIANAVYWLV SDAARYVTGI TLPVDAGFVN KR