| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3981 |
|---|
| Symbol | |
|---|
| ID | 4975296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 4238449 |
|---|
| End bp | 4239549 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640458208 |
|---|
| Product | hydrogenase expression/formation protein HypD |
|---|
| Protein accession | YP_001135240 |
|---|
| Protein GI | 145224562 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0409] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.963935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.745902 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTATC TGGACGAGTT CAGCAATCCC GAACTGGCGC ATCGCCTCAT CGAGCAGATC
GAAGCGGTCG CCACCCGCCG CTGGTCGATC ATGGAAGTGT GTGGCGGACA GACACATTCG
ATCATCCGGC ACGGCATCGA CCAGCTGCTG CCCGATACCG TCGAGATGAT CCACGGACCC
GGCTGCCCGG TCTGCGTCAC GCCGCTGGAG ATCATCGACA AGGCCCTCGA TATCGCGTCG
CGCCCGGAGG TGATCTTCTG CTCGTTCGGC GACATGCTGC GCGTGCCCGG CAGCGAGAAG
GACCTCTTCC GGGTCAAGAG TGAGGGCGCG GACGTGCGCG TCGTCTACTC ACCCCTGGAC
GCGCTGACGA TCGCCCGGGA CAACCCGGAC AGACAGGTCG TGTTCTTCGG CATCGGGTTC
GAGACCACTG CCCCGGCGAA CGCGATGACG GTGTACCAGG CGAAGAAGCT CGGCATCGAG
AACTTCTCGC TGCTGGTCTC CCATGTGCTG GTGCCGCCGG CGATCGCGGC GATCATGGAG
TCCCCGACCT GCCGCGTCCA GGCGTTCCTC GCGGCAGGCC ACGTGTGCAC GGTGATGGGC
ACCGACGAAT ACCCGCCGCT GTGCGACAAG TACGGAACAC CGATCGTCGT CACGGGTTTC
GAACCGCTCG ACATCCTGGA AGGCATCCGG CGCACCGTGA TTCAACTGGA GGCCGGCCGG
CACGAGCTGG AGAACGCCTA TCCGCGCGCG GTCCAGGACA CCGGCAACCC GGCGGCGAAG
GCGATGCTGC TCGACGTGTT CGACGTGACC GACCGGACCT GGCGCGGCAT CGGCATGATC
GCAAGCAGTG GCTGGCGGTT GTCGCCCGCC TACCGGCATT TCGACGCGGA GCACCGCTTC
GCCGCCACCG ACCTCCACAA CGAGGAATCG GCGATCTGCC GCTCCGGCGA GGTTCTGCAG
GGACTGATCA AACCGCACGA GTGCACGGCC TTCGGGACCA GCTGCACACC CCGGAACCCG
CTGGGCGCCA CCATGGTCTC CTCCGAAGGC GCCTGTGCGG CGTACTACCT CTACCGGCGG
CTGGAGGTCA CCCATGCCTG A
|
|---|
| Protein sequence | MKYLDEFSNP ELAHRLIEQI EAVATRRWSI MEVCGGQTHS IIRHGIDQLL PDTVEMIHGP
GCPVCVTPLE IIDKALDIAS RPEVIFCSFG DMLRVPGSEK DLFRVKSEGA DVRVVYSPLD
ALTIARDNPD RQVVFFGIGF ETTAPANAMT VYQAKKLGIE NFSLLVSHVL VPPAIAAIME
SPTCRVQAFL AAGHVCTVMG TDEYPPLCDK YGTPIVVTGF EPLDILEGIR RTVIQLEAGR
HELENAYPRA VQDTGNPAAK AMLLDVFDVT DRTWRGIGMI ASSGWRLSPA YRHFDAEHRF
AATDLHNEES AICRSGEVLQ GLIKPHECTA FGTSCTPRNP LGATMVSSEG ACAAYYLYRR
LEVTHA
|
|---|
| |