Gene Mflv_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3980 
Symbol 
ID4975295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4238135 
End bp4238452 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content66% 
IMG OID640458207 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_001135239 
Protein GI145224561 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.943187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.61085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTGG CGGTACCGGG AAGGATCCTC AGCATCCACG AGCGCGACGG CACCACCATG 
TCGGTCGTCG ACTTCGGCGG AATCAGGAAA AACGTGTGCC TGCAATACCT GCCCGACGCC
CAGGTGGGCC AGTACGTGGT GGTCCACGTC GGGTTCGCGA TACAGCGACT CGACGAGGAA
TCGGCACGAC GCACGCTGGC GGAATTCGCG CATCTCGGCG TCCTCGACGA GGAGTTCGCC
GACGGCTTCG CCTCGGCCGC GCGGCAGGCC CGACTCGCGA ACCCCGACAC CGGCGCACGA
TCGGAGAGCA TCCCGTGA
 
Protein sequence
MCLAVPGRIL SIHERDGTTM SVVDFGGIRK NVCLQYLPDA QVGQYVVVHV GFAIQRLDEE 
SARRTLAEFA HLGVLDEEFA DGFASAARQA RLANPDTGAR SESIP