| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3970 |
|---|
| Symbol | |
|---|
| ID | 4975285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 4229676 |
|---|
| End bp | 4230356 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640458197 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001135229 |
|---|
| Protein GI | 145224551 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGTTT TCACCGAGTA TCGCGAGGAG ATATTCGCCG CGTTCTGGAC GACGGTCCAG
CTCACGGTCC TCTCGGCGAT CGGTGCGCTG GTGCTCGGCA CGGTGCTGGC CGCGATGCGG
CTGGCACCGG TGCCGATGCT CAACTGGATC GGCACCGCGT ACGTCAATCT GGTGCGCAAC
ACCCCGTTGA CGCTGATCAT CCTGTTCTGC TCGTTCGGAC TGGCGCAGAC CCTGGGATTG
ACGTTGGCCG ACAGGCAGTC GCCGACGTTC ATCGCCGACA GCGGCTTCCG GCTGGCAGTG
CTCGGATTGA CCGTCTACAC CGCGTCGTTC GTCTGTGAGA CGGTGCGCGC GGGGGTGAAC
ACGATCCCGC TGGGGCAGGC CGAAGCGGCG CGCTCGCTGG GCTTGACGTT CGGCCAGAAC
CTGCGGATCG TGTTGCTGCC GCAGGCCTTT CGCGCGGTCG TCATTCCGCT GGGCTCGGTG
CTGATCGCGC TGACGAAGAA CACGACGATC GCGTCGGCGA TCGGCGTGGC CGAGGCGGCG
CTGCTGATGA AGGAGATGAT CGAGAACACC GCGGCAGTGC TGGTGGTGGG CGGGATCTTC
GCACTCGGCT TCGTGATCCT CACCCTGCCG CTGGGGCTGG TGTTCGGATG GTTGGGCAAG
CGATTGGCGG TGGCGCGGTA G
|
|---|
| Protein sequence | MEVFTEYREE IFAAFWTTVQ LTVLSAIGAL VLGTVLAAMR LAPVPMLNWI GTAYVNLVRN
TPLTLIILFC SFGLAQTLGL TLADRQSPTF IADSGFRLAV LGLTVYTASF VCETVRAGVN
TIPLGQAEAA RSLGLTFGQN LRIVLLPQAF RAVVIPLGSV LIALTKNTTI ASAIGVAEAA
LLMKEMIENT AAVLVVGGIF ALGFVILTLP LGLVFGWLGK RLAVAR
|
|---|
| |