Gene Mflv_3959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3959 
Symbol 
ID4975274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4217633 
End bp4219039 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content71% 
IMG OID640458186 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_001135218 
Protein GI145224540 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC CTACTTTCGC CGATCTCGGC GTGCCCGCAC CGCTGGTGAA GGCGCTGGCC 
GAGCGCGGCA TCGCCGAACC GTTCCCGATC CAGGCCGCCA CCCTGCCCGA CTCGCTCGCC
GGGCGTGACG TGCTGGGTCG CGGAAAGACC GGCAGCGGAA AGACTCTCGC CTTCTCCATC
CCGCTGGTGG CGGCGCTGAC CGGTATCCGG CGACAGGCAT CGCGTCCGTC GGGTCTGGTG
CTGGCGCCGA CCCGGGAGCT GGCCACGCAG ATCACCGCGG CCCTGGAGCC GATGGCCACC
GCCGCCGGAC TGCGGGTCAC CACCATCTAC GGCGGCGTCT CGCAGGGCCG GCAGGTCTCC
GCGCTGCGCG GCGGGATCGA CATCGTCGTC GCCTGCCCCG GTCGTCTCGA AGATCTGATG
CAGCAGAAGG TGATCAGCCT CGACAACGTC ACGGTCACCG TGCTCGACGA GGCCGACCAC
ATGGCCGATC TGGGCTTCCT GCCCGGGGTC ACCCGCATCC TGGCGGCGAC GCCCCGCGGT
GGGCAGCGCC TGCTGTTCTC GGCGACCCTG GACAACGGCG TCGACAAGCT CGTCCAGCGC
TTCCTCGACA ACCCGGTGCT GCACTCGGTC AACGAGGCCG CCGAGGCGCC CGCGCAGATG
ACCCACCACG TGTTCCACGT CGGCGGCGTG CAGGAGAAGA AGGATCTGGT GCACCAGCTC
GCCTCGGGCA CCGGACGGCG GATCCTGTTC ATGCGCACCA AGCATCAGGC CCGCAAGCTC
GCCAAGCAGC TCACCGAATC CGGTGTGCCC TCGGTGGACC TGCACGGCAA CCTGTCCCAG
CCCGCCCGCG AGCGCAACCT CGCCGCATTC TCCAGTGGTG AGGCCCGGGT GCTGGTCGCC
ACGGACATCG CCGCCCGTGG CGTGCACGTC GACGACGTCG AGCTGGTCGT CCACGTCGAC
CCGCCGATGG AACACAAGGC CTACCTGCAC CGGTCGGGGC GCACCGCGCG TGCCGGCAGT
GACGGCGACG TCGTGACCGT CGTGCTGCCC GAGCAGCGCA GGGACACCCA GCAGCTGTTG
CGCAAGGCGG GCATCACCGT GCGTCCCCGC GACGTGCACG CGAAGTCCTC CGAGGTGCAG
GCGCTCGTCG GCGAGATCGC CCCGCTGCGT GCCCCCGCTC CCGTCGCGCA ACCCGCTGCC
AAGAAGCCAG ATCACGGACG CGGTTCCCGC AACGGCGGGT CCGGCGGCCA CGGTAGGTCG
GGTGGCGAGC ACCAGCGTCG CGGTGGCGGT GGTGGCCGCG GGCGTGACGG GCAGGGCGGC
GGGTCGTCGT CCACCTCGCG TGGTCCGCGG CGCCGTGGGC AGCGTCCGGC AGGTCAGTCT
CAGCGCGGTG TGAACACCGG AGGCTGA
 
Protein sequence
MTAPTFADLG VPAPLVKALA ERGIAEPFPI QAATLPDSLA GRDVLGRGKT GSGKTLAFSI 
PLVAALTGIR RQASRPSGLV LAPTRELATQ ITAALEPMAT AAGLRVTTIY GGVSQGRQVS
ALRGGIDIVV ACPGRLEDLM QQKVISLDNV TVTVLDEADH MADLGFLPGV TRILAATPRG
GQRLLFSATL DNGVDKLVQR FLDNPVLHSV NEAAEAPAQM THHVFHVGGV QEKKDLVHQL
ASGTGRRILF MRTKHQARKL AKQLTESGVP SVDLHGNLSQ PARERNLAAF SSGEARVLVA
TDIAARGVHV DDVELVVHVD PPMEHKAYLH RSGRTARAGS DGDVVTVVLP EQRRDTQQLL
RKAGITVRPR DVHAKSSEVQ ALVGEIAPLR APAPVAQPAA KKPDHGRGSR NGGSGGHGRS
GGEHQRRGGG GGRGRDGQGG GSSSTSRGPR RRGQRPAGQS QRGVNTGG