| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3953 |
|---|
| Symbol | |
|---|
| ID | 4975268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 4210353 |
|---|
| End bp | 4211039 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640458180 |
|---|
| Product | PhzF family phenazine biosynthesis protein |
|---|
| Protein accession | YP_001135212 |
|---|
| Protein GI | 145224534 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
|---|
| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.42181 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.706044 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCG ATGTGACAGT GCTTCGCGTA TTCACTGACC AGGACGGCAG ATTCGGCAAT
CCGCTCGGGG TGGTGGACGC CTCCACCGTC GATCCGGGTG ACCGGCAGCG CATCGCCACC
GAATTGGGCT ACAGCGAAAC GGTTTTCATC ACTTTGCCGC CCGAGGGAAC CCACAGCGCG
CACGCGCACA TCCACACCCC GACCCTGGAG CTGCCGTTCG CCGGGCACCC GACCGTCGGC
GCGGCGTGGT GGCTGCGAGA CCGCGGTACA CCGATCAAGA CGTTGCAGGT GCCGGCCGGC
ATCGTGCAGA TCTCCTACCC GGGTGAACTC GCCGCCGTCA GCGCCCGCGC GGAGTGGGCA
CCGACCTTCT CGATCTACGA CGTCGCGACC CTCGACGAAC TGGCCGCCGC CGATCCCGAC
GATTACGCCG ACGAAGCCGA ACACTATCTG TGGACCTGGA TCGACCAGGC TGCAGGCACG
ATCCGGGCCA GGATGTTCGC CCCGCACATG GGCATCCGCG AGGACGAGGC CACCGGCGCA
GCGGCCGTGC GCATCACCGA GTACCTCAGC CGCGACCTGA CCATCGTGCA GGGCAAGGGC
TCGGTACTCC AGACCACGTG GAGCGCGTAC GGGTGGGTCG AGGTCGCCGG CCGGGTCGTC
GACGACGGAC AGCGCCAGAT CGACTGA
|
|---|
| Protein sequence | MAIDVTVLRV FTDQDGRFGN PLGVVDASTV DPGDRQRIAT ELGYSETVFI TLPPEGTHSA
HAHIHTPTLE LPFAGHPTVG AAWWLRDRGT PIKTLQVPAG IVQISYPGEL AAVSARAEWA
PTFSIYDVAT LDELAAADPD DYADEAEHYL WTWIDQAAGT IRARMFAPHM GIREDEATGA
AAVRITEYLS RDLTIVQGKG SVLQTTWSAY GWVEVAGRVV DDGQRQID
|
|---|
| |