| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3939 |
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| Symbol | |
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| ID | 4975254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | + |
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| Start bp | 4198579 |
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| End bp | 4200045 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640458166 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001135198 |
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| Protein GI | 145224520 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGCGCCC CGACGACCCG CACGACCGAA AGGGTGTACG TGGCAGCGAC CAAGGCCAGC
GCGGCGACCG ACGAGCCGGT GAAGCGCACC GCCGCCAAGG CCCCCGCGAA GAAGGCGCCC
GCGAAGAAGG CCACCAAGGC CACCAAGCCC CGCGCTGCGA AGTCCGCCGA CGCCCCGGCG
ACGCGCGGCC GCGCCAAGAA GGCCACCGCC GCCGAGCCGG GTGTCGTCGA CGACGAACTC
ACCGGCACCG AGGTCGACGC CACCGACGAC ATCGAGCCCG GCGAGGATCT CGTCGACGAC
GGTGACCTCG AGCTCGACGA CATCGAGGTC GAGGACGAGG CCACCGAGGA CGACGATTCC
GACGACGAGG CCGCCGAGGC CGATCCGGTG GTGGCCACCA CCAAGGCCGC CGCGAAGCCG
GCCAAGGAGG CCGACGACGA TTCGCTCCCC GAGCCGTCGG AGAAGGACAA GGCCTCCGGA
GACTTCGTCT GGGACGAAGA GGAGTCCGAG GCGCTGCGTC AGGCCCGCAA GGACGCCGAG
CTCACCGCAT CGGCCGACTC GGTTCGCGCC TACCTCAAGC AGATCGGCAA GGTCGCGCTC
CTCAACGCCG AGGAAGAGGT CGAGCTCGCC AAGCGCATCG AGGCCGGCCT GTACTGCACG
CAGCTGATGG CCGAGTTCGC CGAGAAGGGC GAGAAGCTCA CCACCGCGCA GCGGCGTGAC
TACATGTGGA TCTGCCGCGA CGGCGACCGC GCGAAAAATC ATCTGCTGGA AGCGAACCTG
CGCCTGGTGG TGTCGCTGGC CAAGCGCTAC ACCGGCCGCG GCATGGCGTT CCTGGACCTC
ATCCAGGAGG GCAACCTCGG CTTGATCCGC GCCGTGGAGA AGTTCGACTA CACCAAGGGT
TACAAGTTCT CGACCTACGC GACGTGGTGG ATCCGTCAGG CGATCACCCG CGCGATGGCC
GATCAGGCGC GCACCATCCG CATCCCGGTG CACATGGTCG AGGTCATCAA CAAGCTCGGC
CGCATCCAGC GCGAGCTCCT TCAGGACCTG GGTCGCGAGC CCACCCCCGA AGAGCTGGCC
AAGGAAATGG ACATCACGCC GGAGAAGGTG CTGGAGATCC AGCAGTACGC GCGTGAGCCG
ATCTCGCTGG ACCAGACCAT CGGCGACGAA GGCGACTCGC AGCTCGGCGA TTTCATCGAG
GACTCCGAGG CCGTCGTCGC CGTCGACGCC GTGTCCTTCA CGCTGCTGCA GGACCAGCTG
CAGTCGGTGC TGGAGACGTT GTCCGAGCGT GAGGCAGGCG TCGTCCGCCT GCGGTTCGGC
CTCACCGACG GCCAGCCGCG CACCCTCGAC GAGATCGGCC AGGTCTACGG CGTGACGCGC
GAGCGCATCC GTCAGATCGA GTCGAAGACG ATGTCGAAGT TGCGCCATCC CAGCCGGTCT
CAGGTGCTGC GCGACTACCT GGACTAG
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| Protein sequence | MCAPTTRTTE RVYVAATKAS AATDEPVKRT AAKAPAKKAP AKKATKATKP RAAKSADAPA
TRGRAKKATA AEPGVVDDEL TGTEVDATDD IEPGEDLVDD GDLELDDIEV EDEATEDDDS
DDEAAEADPV VATTKAAAKP AKEADDDSLP EPSEKDKASG DFVWDEEESE ALRQARKDAE
LTASADSVRA YLKQIGKVAL LNAEEEVELA KRIEAGLYCT QLMAEFAEKG EKLTTAQRRD
YMWICRDGDR AKNHLLEANL RLVVSLAKRY TGRGMAFLDL IQEGNLGLIR AVEKFDYTKG
YKFSTYATWW IRQAITRAMA DQARTIRIPV HMVEVINKLG RIQRELLQDL GREPTPEELA
KEMDITPEKV LEIQQYAREP ISLDQTIGDE GDSQLGDFIE DSEAVVAVDA VSFTLLQDQL
QSVLETLSER EAGVVRLRFG LTDGQPRTLD EIGQVYGVTR ERIRQIESKT MSKLRHPSRS
QVLRDYLD
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