| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3928 |
|---|
| Symbol | |
|---|
| ID | 4975243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 4190963 |
|---|
| End bp | 4191628 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640458155 |
|---|
| Product | TrkA domain-containing protein |
|---|
| Protein accession | YP_001135187 |
|---|
| Protein GI | 145224509 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0399436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.479008 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCG CCATCGCCGG AGCAGGAGCG GTCGGCCGCT CCATCGCCCG TGAACTCGTC
GACGCCCACG AGGTCACCCT GCTGGAGCGC AACGCCGAAC ACATCGACGT CAACGCGATT
CCCGCCGCGC ACTGGCGTCT CGGCGACGCG TGCGAGCTGA GCCTGCTGGA GTCGGTGAAA
CTGCAGGAGT TCGACGTGGT GATCGCCGCG ACCGGCGACG ACAAGGCCAA CGTCGTGTTG
AGCCTGCTGT CCAAGACAGA ATTCGCGGTA CCGCGGGTGG TCGCGCGGGT CAACGACCCC
CGCAACGAAT GGCTTTTCGA CGAGTCCTGG GGTGTGGACG TGGCGGTGTC CACGCCGCGC
ATGCTCGCCT CACTGGTCGA GGAGGCGGTC TCGGTCGGCG ACCTGGTCCG GCTGATGGAG
TTCCGCAAGG GCCAGGCCAA CCTCGTCGAG ATCACGCTGC CCGACGACAC CCCGTGGGGC
GGCAAGCCGG TGAAGCGTCT CGAGCTGCCC CGCGATGCGA CCCTGGTGAC GATCCTGCGC
GGGCCGCGGG TCATCGTCCC GGAGCGTGAC GAGCCGCTGG AGGGCGGTGA CGAGTTGTTG
TTCGTCACCG CGGCCGAGGC GGAGGACGAG CTGCGGACGC TGCTGCTCAA TCCTCAGCAG
CGCTGA
|
|---|
| Protein sequence | MKVAIAGAGA VGRSIARELV DAHEVTLLER NAEHIDVNAI PAAHWRLGDA CELSLLESVK
LQEFDVVIAA TGDDKANVVL SLLSKTEFAV PRVVARVNDP RNEWLFDESW GVDVAVSTPR
MLASLVEEAV SVGDLVRLME FRKGQANLVE ITLPDDTPWG GKPVKRLELP RDATLVTILR
GPRVIVPERD EPLEGGDELL FVTAAEAEDE LRTLLLNPQQ R
|
|---|
| |