Gene Mflv_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3924 
SymbolnhaA 
ID4975239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4185517 
End bp4186860 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content69% 
IMG OID640458151 
ProductpH-dependent sodium/proton antiporter 
Protein accessionYP_001135183 
Protein GI145224505 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00452006 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.998293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGCCA CACCTCTGCC ACCGCCTCGC CGCCCGGTGT TCTCCCGCGG ATCATGGGCG 
GAGACCCGGC GGGTCACCGA GATCCTGCGC AAGGAGACCG TCGGTGGCGT CATCCTGTTG
GTCGCCGCCG CCGCAGCGCT GATCTGGGCG AATTCTCCGT GGGCGGAGGG CTATTTCGCA
TTGCGCGACC TCGAGCTCGG CGGCGAGTGG TTCGGGCTGC ACCTCAACCT CACGCTGGGG
GCGTGGGCGG CAGACGGGCT GCTCGCGATC TTCTTCCTCG TGGTCGGGCT GGAGTTGAAG
CGGGAGTTCG TCGCCGGTGA CCTCCGGGAC CCGAGCCGGG CGGCACTGCC CATCGCCGCG
GCCGTCGGCG GCATGGTGGT TCCCGCACTG ATCTTCGTCC TGGTGAATCT GAACACCGGG
GACGGCGCGC TGCGCGGCTG GGCGATCCCG ACCGCGACCG ACATCGCGTT CGCGGTGGCG
GTGCTCGCCG TGATCGGCAC ACATCTACCG TCGGCGCTGC GGACGTTCCT GCTGACTCTG
GCCGTGGTCG ACGATCTGCT GGCGATCACC GTGATCGCGG TGTTCTACAC CGAGGACATC
AACGGGCTGG CTCTGGCGCT GGCCGCCGTC CCGCTGGCGC TGTTCGCACT CTGCGTGCAG
CGCGGGGTGC AGAAGTGGTG GGTGCTGGTG CCGCTGTCGG TGGCCACGTG GGTGCTGATG
CACGAATCCG GTGTGCACGC GACGGTGGCC GGTGTGCTGC TCGGCTTCGC GGTGCCGGTA
CGGCGCCAGG CGACCCCGCG CGGCCGCGGT CCCGCGCCGT CGCAGCGGGT CGGGATGGCC
GAGTATTTCG AGCACCGGGT GCGTCCGGTC TCCGCGGGCA TCGCGATCCC GGTGTTCGCG
TTCTTCGCCG CCGGCGTCAG CATCGGCGGC CTCGACGGTT TCACCCGAGC CCTCAGCGAC
CCGATCACGT TGGGCATCGT GCTCGGACTG GTCCTGGGCA AGCCGATAGG AATCGTGCTC
ACCACCCGGG TCTTGTCCGC GGTGACACGG GCCAACCTCG ACGCGTCGCT GCGCTGGGTC
GACGTGGTCG GAATGTCGAT GCTGGCCGGG ATCGGCTTCA CGGTGTCGCT GCTGATCGGC
GATCTGGCCT ACGGGCTGGG GTCCGAACGT GACGAATTTG TGAAGATCGG CGTGTTGTTC
GGCTCACTGC TGGCAGCGGG TGTGGCGGCA GTCGTCCTGC TCACCAGAAA CCGTGCCTAC
CGGCGCATTT ACCGCGAAGA GACGGTCGAC GAAGACCGCG ACGGAGTGCC CGATGTGTAC
CAGACTCGAC AGGACCGGAC CTGA
 
Protein sequence
MAATPLPPPR RPVFSRGSWA ETRRVTEILR KETVGGVILL VAAAAALIWA NSPWAEGYFA 
LRDLELGGEW FGLHLNLTLG AWAADGLLAI FFLVVGLELK REFVAGDLRD PSRAALPIAA
AVGGMVVPAL IFVLVNLNTG DGALRGWAIP TATDIAFAVA VLAVIGTHLP SALRTFLLTL
AVVDDLLAIT VIAVFYTEDI NGLALALAAV PLALFALCVQ RGVQKWWVLV PLSVATWVLM
HESGVHATVA GVLLGFAVPV RRQATPRGRG PAPSQRVGMA EYFEHRVRPV SAGIAIPVFA
FFAAGVSIGG LDGFTRALSD PITLGIVLGL VLGKPIGIVL TTRVLSAVTR ANLDASLRWV
DVVGMSMLAG IGFTVSLLIG DLAYGLGSER DEFVKIGVLF GSLLAAGVAA VVLLTRNRAY
RRIYREETVD EDRDGVPDVY QTRQDRT