| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3923 |
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| Symbol | |
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| ID | 4975238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | - |
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| Start bp | 4183581 |
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| End bp | 4185494 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640458150 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001135182 |
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| Protein GI | 145224504 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00988598 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.567804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAC AGATCCGCGG TCCAGCAGAT CTACAGCACC TGTCGAGGGC CCAGATGGAG
GACCTGGCCC GCGAAATCCG CGACTTCCTG ATCCACAAGG TCGCGGCGAC AGGCGGACAT
CTGGGACCCA ACCTCGGCGT TGTCGAGTTG ACGCTTGCGC TGCACCGCGT CTTCGACTCC
CCGCACGATC CGATCCTGTT CGACACCGGA CACCAGGCGT ACGTCCACAA GATGCTGACC
GGTCGCAGCC GGGATTTCGA CACCCTCCGC AAGAAGGACG GGCTGTCGGG ATATCCGTCG
CGCTCCGAGA GCGAGCACGA CTGGGTGGAG TCCAGCCACG CCAGTTCGGC GCTGTCGTAC
GCCGACGGTC TGGCCAAGGC CTTCGAGCTC AACGGCCACC GCAACCGCCA TGTCGTCGCG
GTCGTCGGTG ACGGCGCGCT GACCGGTGGA ATGTGCTGGG AGGCGCTGAA CAACATCGCG
GCCTCGCGCC GGCCCGTCGT GATCGTGGTC AACGACAACG GCCGCAGCTA CGCCCCGACC
ATCGGTGGCT TCGCCGAGCA CCTCGCGGGT CTGCGGTTGC AGCCCGGCTA CGAGCGGGTG
CTCGAGGAGG GCCGCAAAGC CGTCCGCGGC GTACCGATGA TCGGCGAGTT CTGCTACCAG
TGCATGCACA GCATCAAGGC CGGCATCAAG GACGCCCTGT CGCCGCAGGT GATGTTCACC
GATCTCGGCC TCAAGTACGT GGGCCCCATC GACGGTCATG ACGAGTCGGC GGTGGAGGGT
GCGTTGCGGC ATGCCCGCGC GTTCAACGCC CCCGTCGTCG TGCACGTCGT CACCCGCAAG
GGCATGGGCT ACGCGCCGGC CGAGAACGAC GTCGACGAGC AGATGCACGC CTGCGGTGTC
ATCGACCCCG AGACCGGCCT GGCCACTTCG GTTCCCGGCC CCGGCTGGAC GGCGGCGTTC
TCCGAGACCT TGATCGAGTT GGCCGCCAAG CGCCGCGACA TCGTGGCGAT CACGGCCGCG
ATGCCGGGTC CGACCGGTCT GAGTGCGTTC CGGAAACGCT TCCCGGACCG GTTCTTCGAC
GTCGGTATCG CCGAGCAGCA CGCGATGACG TCGGCCGCCG GCCTGGCCAT GGGCGGTATG
CACCCGGTGG TCGCGCTCTA CTCGACGTTC CTCAACCGCG CGTTCGACCA GATGCTGATG
GACGTTGCGC TGCACAAACT TCCGGTGACC ATGGTGCTGG ACCGCTCCGG CATCACGGGT
CCCGACGGGG CCAGCCACAA CGGCATGTGG GATCTGTCGA TCCTGGGCAT CGTGCCCGGC
ATGCGGGTGG CCGCCCCGCG CGACGGCGCC CGCCTGCGCG AGGAACTCGC CGAGGCCGTC
GAGGTCAAGG ACGGCCCGAC CGCGGTGCGG TTCCCGAAAG GTGATGTCGG CGAAGACATT
CCGGCCATCG AGCGCCGCGA CGGTGTCGAC GTGCTCGCGG TGCCCGCGGA CGGTCTGTCC
GACGACGTTC TCATCATCGC GGTCGGAGCG TTCGCCGCGA TGTCGGTCGC GGTGGCCGAG
CGGCTGCGCG ATCAGGGGAT CGGCGTGACC GTGGTCGATC CGCGGTGGGT GCTCCCGGTG
CCCGCCGCGA TCAACACCCT CGCCGCCGCG CACAAGCTCG TGGTCACCGT CGAGGACAAC
GGCGGGCACG GCGGTGTCGG GTCGGCCGTG TCGGCGGCCC TGCGTCGCGC CGAGATCGAC
GTGCCGTGCC GCGACGCCGC GTTGCCGCAG GCCTTCTTCG ATCACGCCTC GCGCGGTGAG
GTGCTCGCCG AGGTCGGGTT GACCGAGCGC ACCATCGCCC GCCAGATCAC CGGCTGGGTG
GCCGCTCTCG GCGCGACGGC CGGCGACCGC CAGGTCAGCG AATCCGTCGA CTGA
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| Protein sequence | MLEQIRGPAD LQHLSRAQME DLAREIRDFL IHKVAATGGH LGPNLGVVEL TLALHRVFDS
PHDPILFDTG HQAYVHKMLT GRSRDFDTLR KKDGLSGYPS RSESEHDWVE SSHASSALSY
ADGLAKAFEL NGHRNRHVVA VVGDGALTGG MCWEALNNIA ASRRPVVIVV NDNGRSYAPT
IGGFAEHLAG LRLQPGYERV LEEGRKAVRG VPMIGEFCYQ CMHSIKAGIK DALSPQVMFT
DLGLKYVGPI DGHDESAVEG ALRHARAFNA PVVVHVVTRK GMGYAPAEND VDEQMHACGV
IDPETGLATS VPGPGWTAAF SETLIELAAK RRDIVAITAA MPGPTGLSAF RKRFPDRFFD
VGIAEQHAMT SAAGLAMGGM HPVVALYSTF LNRAFDQMLM DVALHKLPVT MVLDRSGITG
PDGASHNGMW DLSILGIVPG MRVAAPRDGA RLREELAEAV EVKDGPTAVR FPKGDVGEDI
PAIERRDGVD VLAVPADGLS DDVLIIAVGA FAAMSVAVAE RLRDQGIGVT VVDPRWVLPV
PAAINTLAAA HKLVVTVEDN GGHGGVGSAV SAALRRAEID VPCRDAALPQ AFFDHASRGE
VLAEVGLTER TIARQITGWV AALGATAGDR QVSESVD
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