Gene Mflv_3921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3921 
Symbol 
ID4975236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4181124 
End bp4182398 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content72% 
IMG OID640458148 
Product3'-5' exonuclease 
Protein accessionYP_001135180 
Protein GI145224502 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0599222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.377352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAC CCGAGACCGC CGGCTCCGCG CCGGAAACAC CTGAACCGAC CGACATCGAG 
GCCGAACCTC TTCTCACCCC GCGCGACGGG GTGCCGGACG TGTCGTCCAG CCGCATGGAA
ATCGCCAGGG CGGCAGACCT TCTCGCGTCG GGTACCGGTC CCTTCGCCGT CGATGCCGAA
CGCGCGTCGG GCTTCCGGTA CTCCAACCGC GCGTATCTGG TGCAGATCCG TCGCGTCGGG
GCGGGAACGG TGCTCATCGA CCCTGTCAGC CACGGCGGCG ACCCGATGGA GGTCCTGGCC
CCGGTGGCCG CGGTCCTCTC CACCGACGAG TGGGTGCTGC ACGCCGCCGA CCAGGACCTG
CCGTGCCTGG CCGAGATCGG CATGCGCCCC ACCGCGCTCT ACGACACCGA ACTCGCGGGC
CGCCTCGCCA ACTTCGACCG GGTGAACCTC GCCGCCATGG TGCAGCGTCT GCTCGGCCTG
CAGTTGACCA AGGGCCACGG CGCGGCCGAC TGGTCCAAGC GGCCGCTGCC CGACGAGTGG
CTGAACTACG CCGCCCTCGA CGTCGAGGTG CTGACCGATC TGCGCGAGGC GATCGCCGCG
GTTCTCGATG AGCAGGGCAA GGCCGAATGG GCACGCCAGG AGTTCGAGTA CCTGCGCACG
TTCGAAGGAT CCCCCACGCG CCGGGACCGG TGGCGCCGGA CCTCGGGTAT CCACAAGGTG
CGCGACCCCC GGGCGTTGGC CGCGGTGCGC GAACTGTGGA CCACCCGCGA CCAGATCGCG
CGGCGCCGCG ACATCGCCCC CGGACGGATC CTGCCCGACA GCGCGATCAT CAGCGCCGCC
ACCGCCAACC CCGACACCAT CGAAAAGCTC ACGGCCCTAC CGGTTTTCGG TGGCTCGAAG
CAGCGCCGCA GCGCCCAGGT GTGGCTCGAC GCGCTCGCGC GCGCCCGCAC CAACGACCCA
CCCGACGCGC AGGAACCGTC CAACGGTCCC CCGCCGGCGT CGCGCTGGTC GCGGCGCAAG
CCGGAGGCGG CGGTACGACT GGAGGCCGCC CGCGCCGAAT TGACCGCGCT CGCCCAACAG
GTGTCGGTAC CGGTCGAGAA CCTGCTGTCC CCGGAGACCG TGCGGCGGCT GTGCTGGGAC
TGGCAGCCGC CCGCCGACGG CGACGCCACC GCTGCGGTGG AGGCGTTCCT GCGCGACTCG
ACGGCCAGAC AGTGGCAACG CGAGCTGACC GTGCCGGCGT TGGGCCGGGC GCTCAGTGAG
CCCCCGGTCA GCTGA
 
Protein sequence
MPEPETAGSA PETPEPTDIE AEPLLTPRDG VPDVSSSRME IARAADLLAS GTGPFAVDAE 
RASGFRYSNR AYLVQIRRVG AGTVLIDPVS HGGDPMEVLA PVAAVLSTDE WVLHAADQDL
PCLAEIGMRP TALYDTELAG RLANFDRVNL AAMVQRLLGL QLTKGHGAAD WSKRPLPDEW
LNYAALDVEV LTDLREAIAA VLDEQGKAEW ARQEFEYLRT FEGSPTRRDR WRRTSGIHKV
RDPRALAAVR ELWTTRDQIA RRRDIAPGRI LPDSAIISAA TANPDTIEKL TALPVFGGSK
QRRSAQVWLD ALARARTNDP PDAQEPSNGP PPASRWSRRK PEAAVRLEAA RAELTALAQQ
VSVPVENLLS PETVRRLCWD WQPPADGDAT AAVEAFLRDS TARQWQRELT VPALGRALSE
PPVS