Gene Mflv_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3908 
Symbol 
ID4975223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4169979 
End bp4170500 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content70% 
IMG OID640458135 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001135167 
Protein GI145224489 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.407015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTCAC ATCCCGGTGT CCCCCGGCGT CTTCATGATG TGAAGGTGCG ACCGTTCGAA 
GAAATCGTGG CGTGTCACGG TGCGACCGTG CTCCGGGTGT GCCGCGCCGT CGTGGGACCG
GTGGATGCCG AGGACGCGTG GTCCGAGACG TTCCTGTCGG CGTTGCGTGC ATACCCCGAG
CTTCCCGAGG ACGCCAATGT CGAGGCATGG CTGGTGACCA TCGCCCACCG GCGTGCCCTC
GACCTCGGCC GAGCCCGCTC GCGGCGGGCG GTCCCCACCG ACTCGGTCCC CGAACGCTGC
GATGCGCGTG CAGACCCCGC CGCCCGCGAC CCCGACCTGT GGGCGGCGCT CGCTCGGCTT
CCCGACAAAC AGCGCCACGC CGTGGCCTAC CACCACATCG CCGGACTGCC CTTCACCGAG
ATCGCCGTCA TCCTGGGCAA CTCCCCCGAG GCCGCGCGGC GTGCCGCGGC CGACGGGATC
AAGGCCCTCC GCTCGTACTA CCGTGAGGAC GAATCAGCAT GA
 
Protein sequence
MISHPGVPRR LHDVKVRPFE EIVACHGATV LRVCRAVVGP VDAEDAWSET FLSALRAYPE 
LPEDANVEAW LVTIAHRRAL DLGRARSRRA VPTDSVPERC DARADPAARD PDLWAALARL
PDKQRHAVAY HHIAGLPFTE IAVILGNSPE AARRAAADGI KALRSYYRED ESA