Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_3908 |
Symbol | |
ID | 4975223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 4169979 |
End bp | 4170500 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640458135 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001135167 |
Protein GI | 145224489 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.407015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCTCAC ATCCCGGTGT CCCCCGGCGT CTTCATGATG TGAAGGTGCG ACCGTTCGAA GAAATCGTGG CGTGTCACGG TGCGACCGTG CTCCGGGTGT GCCGCGCCGT CGTGGGACCG GTGGATGCCG AGGACGCGTG GTCCGAGACG TTCCTGTCGG CGTTGCGTGC ATACCCCGAG CTTCCCGAGG ACGCCAATGT CGAGGCATGG CTGGTGACCA TCGCCCACCG GCGTGCCCTC GACCTCGGCC GAGCCCGCTC GCGGCGGGCG GTCCCCACCG ACTCGGTCCC CGAACGCTGC GATGCGCGTG CAGACCCCGC CGCCCGCGAC CCCGACCTGT GGGCGGCGCT CGCTCGGCTT CCCGACAAAC AGCGCCACGC CGTGGCCTAC CACCACATCG CCGGACTGCC CTTCACCGAG ATCGCCGTCA TCCTGGGCAA CTCCCCCGAG GCCGCGCGGC GTGCCGCGGC CGACGGGATC AAGGCCCTCC GCTCGTACTA CCGTGAGGAC GAATCAGCAT GA
|
Protein sequence | MISHPGVPRR LHDVKVRPFE EIVACHGATV LRVCRAVVGP VDAEDAWSET FLSALRAYPE LPEDANVEAW LVTIAHRRAL DLGRARSRRA VPTDSVPERC DARADPAARD PDLWAALARL PDKQRHAVAY HHIAGLPFTE IAVILGNSPE AARRAAADGI KALRSYYRED ESA
|
| |