Gene Mflv_3888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3888 
Symbol 
ID4975203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4152679 
End bp4153821 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content71% 
IMG OID640458111 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001135147 
Protein GI145224469 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.648797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.259549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTCA CCCGCCGGTC CCCCGCGGCA TCGACGCGAA GGTGGCGCCG GCCCGGTATC 
GGCCTGCGCC TACTGGCCGC GCAAGCCATC GTGCTGGCCG TCGGCGCCGC CACCACCGCG
GTGGTGGCGG CCGTGGTGGG TCCGCCGTTG TTCCAGGAGC ATCTCCACCG CGCGGGTGTG
CCGATGAACT CGCCGGAAGA GATGCACGCC GAGGAGGCCT ACGGGTACGC CACGGTGATG
TCGATCGGCG GCGCGCTCGC GGTGTCGGCG CTGGCCGCGC TCGCCGTGAG CGTCTACGTG
AGCCGACGAC TCCAGCGATC GGTCACCGAG GTCGCCTGTG CGGCAGCGCT CGTCGCCGAG
GGGCGCTACG ACATACGGGT CTCCCCGCCC CGTCTCGGCG ACGATTTCGA CGCTCTCGCC
ACGGCGTTCA ACCAGATGGC GTCGAGACTG CAGTCAGTGG AGAGCACCCG CCGACGACTG
TTCGGCGACC TCGCCCATGA GATCCGCACA CCCGTCGCCG TGCTCGACGC GTACGTCGAG
GCGCTTGAGG ACGGGGTGCG CACGCTGAAC CCGGACACGG TCGCGGTGTT GCGGGATCAG
ACCGGACGCC TGGTGCGCTT CTCCGGCGAC GTCGCCGCGC TGGCGAAGGC CGAGGAAAGC
TCCGTCACGA TGACCTACAC CGAGGTCGAC CTCGACGGCC TGGTCCGTCG CGCCGTGGCG
GCCGCCCGCG AACGCTACGA GACCAAAGGT GTTGCGCTGC AAGTCATGTC AGCGCGGGAA
CTGCCGCTGT TGCGGGCCGA CGAGCAGCGA CTCTCGCAGG TTCTCGACAA CCTGCTCGAC
AACGCACTGC GACACACCGC GCGCGGAGGC CGGGTCGAGA TCCACTGTCA CACCGAGGGA
GCCCGCGTGC GGATCGCCGT CACCGACGAC GGTGAGGGGA TCGCCGCCGA GCACCTGTCC
AGTGTGTTCG AGCGGTTCTA CCGGGCCGAC GCGGCACGCG ATCGCGAGCA CGGCGGAGCC
GGACTGGGCC TCGCCATCGC GAAAGCCCTT GTCGAGGCGC ACGGCGGTTC GGTAACCGCA
GCCAGCGATG GGGCCGGCAC CGGCGCGACG TTCACCGTCG AGCTGCCGAC GACCCGTCCC
TGA
 
Protein sequence
MSVTRRSPAA STRRWRRPGI GLRLLAAQAI VLAVGAATTA VVAAVVGPPL FQEHLHRAGV 
PMNSPEEMHA EEAYGYATVM SIGGALAVSA LAALAVSVYV SRRLQRSVTE VACAAALVAE
GRYDIRVSPP RLGDDFDALA TAFNQMASRL QSVESTRRRL FGDLAHEIRT PVAVLDAYVE
ALEDGVRTLN PDTVAVLRDQ TGRLVRFSGD VAALAKAEES SVTMTYTEVD LDGLVRRAVA
AARERYETKG VALQVMSARE LPLLRADEQR LSQVLDNLLD NALRHTARGG RVEIHCHTEG
ARVRIAVTDD GEGIAAEHLS SVFERFYRAD AARDREHGGA GLGLAIAKAL VEAHGGSVTA
ASDGAGTGAT FTVELPTTRP