Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_3882 |
Symbol | |
ID | 4975197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 4145964 |
End bp | 4146944 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640458105 |
Product | periplasmic binding protein |
Protein accession | YP_001135141 |
Protein GI | 145224463 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.410951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCCTT CACGTCGCTG CCTGTCCTCT GTCGCCGCGG TGATGGCCGC CCTCGTGTCG CTGACCGGTT GCGCTGCGTC CGCCCCGCCG GAGTCGGGCG CCACGTCAGC GGTCGTGTCG GTCGACAACT GCGGTGAGCA GATCCGTCTC GAGGCTCCTC CACAGCGCGC CGTCGGTTAC TTCCAGCAGT CCGTCGAGTT GATGCTCGCA CTGGGATTGG GCGAGTCCGT GGTGGCCACG GTCTACCCCG ACAATCCGCC GCTGCCGCGG TACGCCGAGG CCTACCGGTC GATCCCGCAG TTGTCGAACA AGGACGCGTC GTTCGAGCAG GTCCTCTCCG CGGCACCCGA TTTCGTCTAC GGCGGGTATG CCAGTGCGTT CGACGACACC GCCGGACGTT CCCGGCGGGC ATTCCACGAT GCCGGCGTCG CGACCTATCT CAACCCGGAA TACTGTGCGA CAGAACCGAT CACGATGGAC GATGTGCACA CCGAGATCCG CACGATCGCC GCGATCTTCG GTGTGCCGGA ACGGGCCGAC GCGCTCATCG AGGAGATGCG GGACCGGGTG GCCGCGGCAG CCGCGGCCGT CGACGGCGTC CGCACCGCGA AGATCTTCGT CTACGACAGC GGCGAGGACA CCGCGTTCAC CGCCGGCCGT CAGGGCATCG GCAACCAGAT CATCGAACTG GCGGGCGGGA CGAACATTTT CGGCGATGTC GAGGACACGT TCGCCGACGT CTCGTGGGAA CAGGTGGTCC AGCGCAATCC GGACGTCATC GTCATCTACG ACTACTTCGG CACCCCGTCG GTGGAGGACA AGTGGGCGTT CCTGCGGTCC AGGCCTGAAC TCGCCGGCGT ACCCGCCATC CGTGACGACC GCTACGCAGT GCTGACCCTC CAGGATGCGG TCCTCGGAGT CCGCGCGCCC TACGCGGTCG AGACCCTTGC CCGACAAGTA CATCCGGAGC GCTTCCGGTG A
|
Protein sequence | MMPSRRCLSS VAAVMAALVS LTGCAASAPP ESGATSAVVS VDNCGEQIRL EAPPQRAVGY FQQSVELMLA LGLGESVVAT VYPDNPPLPR YAEAYRSIPQ LSNKDASFEQ VLSAAPDFVY GGYASAFDDT AGRSRRAFHD AGVATYLNPE YCATEPITMD DVHTEIRTIA AIFGVPERAD ALIEEMRDRV AAAAAAVDGV RTAKIFVYDS GEDTAFTAGR QGIGNQIIEL AGGTNIFGDV EDTFADVSWE QVVQRNPDVI VIYDYFGTPS VEDKWAFLRS RPELAGVPAI RDDRYAVLTL QDAVLGVRAP YAVETLARQV HPERFR
|
| |