Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_3857 |
Symbol | |
ID | 4975173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 4119971 |
End bp | 4121137 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640458081 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001135117 |
Protein GI | 145224439 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.116252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGACG ATCCGCGTCC GACCGGAGGG CTCGACGACT TCTTCGACAG TGCGCCCTGC GGGCTGCTGC TGACCTCACC CGACGGCCGG ATCATCCGCG CCAACGAGAC GTTCAGCCGG TGGGTCGGAT ACCGGTCCGA GCACCTCACC GGCCGGCAGT TCCCCGATCT GCTCGCCGCC GGCAGCAGGA TTCACTACGA GACCCACTTC GTGTCGATGC TCCACATGAA CGGCTCGCTC GACGGCGTCG CGGCCGATCT GCTCACCGCA GACGGAACGA GGCTGGCGGG GTTCGTCACC GCGAACGTCG AGCGCGATGC CGCGGGGGCG GTGGTGGCGC TGCGGATCGC GATCCAGGAT GCCAGCGAAC GCCGTTCGTA TGAGCGCGAA CTCCTCGAGA CCCGGCGCCG CGCCGACCGT GAACGGGAGC GTGCGCAGGT GCTCGCCGCG ACCCTGCAGC GGTCCCTGAT CCCGCCGACG TTGTCGCCGC CGCGCGGGTT GACCGCGGCG GCCCACTACC ACAACGCCTC CCGCGACGAC GTCGGTGGAG ATTTCTACGA TCTCTTCCCG ATGGCCGAGG ACCGATGGGG CATGTTCCTC GGCGACGTGT CGGGTAAGGG TGCCGGTGCG GCCGCCGTGA CCTCGCTGAC GCGCTACACC CTGCGCGCCG CCGCGGTCAA CGACCGTGAC CCGGTCGCGG TGTTGCACAC CCTCGACGCG GTCCTCAGCC ACGAGTTCCA CGGCGACGAC CCCCGGTTCT GCACGGTGAT CTTCGGGGTG ATCACCGCGG CACCCGACGG CTTCGACGTG CAGCTCGCCA CCGGCGGTCA TCCCCCCGCG CTGCTGCTGC CGGTGGACGG CCCCGCACGC TACGTCGCCA CCCCCGGGGG TCAGGCCGTG GGGCTGATCA GGAACCCGAG ATTCGTCTCG ACCAGCGTGC ATCTGGGCCC CGGGGACACG CTGGTGATGT ACACCGACGG TCTGACCGAG GCGAAGACGG GACGCACGAG GCGCTTCGAC GACGACGACG CCCTGCTCGA GTTCGCCGGG CGCCACACGC CGACCGACGC CGGCGCTTTC GTCGAGGCCG TTCGCGTGCT GCTCGCCAGC TTCGGCGACG GACTCGAAGA CGATGCCGCG GTGATCGCGC TCAGCGTGCC CCGCTGA
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Protein sequence | MTDDPRPTGG LDDFFDSAPC GLLLTSPDGR IIRANETFSR WVGYRSEHLT GRQFPDLLAA GSRIHYETHF VSMLHMNGSL DGVAADLLTA DGTRLAGFVT ANVERDAAGA VVALRIAIQD ASERRSYERE LLETRRRADR ERERAQVLAA TLQRSLIPPT LSPPRGLTAA AHYHNASRDD VGGDFYDLFP MAEDRWGMFL GDVSGKGAGA AAVTSLTRYT LRAAAVNDRD PVAVLHTLDA VLSHEFHGDD PRFCTVIFGV ITAAPDGFDV QLATGGHPPA LLLPVDGPAR YVATPGGQAV GLIRNPRFVS TSVHLGPGDT LVMYTDGLTE AKTGRTRRFD DDDALLEFAG RHTPTDAGAF VEAVRVLLAS FGDGLEDDAA VIALSVPR
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