Gene Mflv_3854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3854 
Symbol 
ID4975170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4116639 
End bp4117868 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content66% 
IMG OID640458078 
ProductABC transporter related 
Protein accessionYP_001135114 
Protein GI145224436 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.110244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAA TCACGATGCG CAATATCGTC AAGAAATACG GTGACGGCTA TCCGGCCGTC 
AACGATGTGA GCCTCGACAT CGCCGACGGT GAGTTCGTGA TCCTCGTCGG TCCGTCGGGC
TGCGGCAAGT CGACCCTGCT GCGGATGATC GTGGGGCTCG AGGACATCAC GTCCGGGGAC
ATGATGATCG GCGACAAGCG GGTCAACGAC ATGGCTCCGC GCGACCGCAA CCTGGCCATG
GTGTTCCAGA ACTACGCGCT CTACCCGCAC CTGACGGTGT TCGAGAACAT CGCGTTCCCA
CTTCGGTTGG CGGGCAAGCT GTCCGACGAC GAGATCCGGC AGCGGGTCAA CGACGCGGCC
ACGACGCTCG AGCTCGGCGA GCATCTCGAC CGCAAGCCGG CCAACCTGTC GGGCGGTCAG
CGTCAGCGGG TCGCGATGGG TCGCGCGATC GTGCGCGAGG CCGACGCGTT CCTGTTCGAC
GAACCGCTGA GCAACCTCGA TGCCAAGCTG CGCGGCCAGA TGCGCACCGA GATCCTGCGC
CTGCAACGCA AACTGGGTGT CACGACCGTG TACGTGACGC ACGACCAGAC AGAGGCGATG
ACGCTGGGCG ATCGCGTCGC GGTGCTCAAG AAGGGTGTGC TGCAGCAGGT CGCCAGCCCG
CGCGAACTCT ACGACCAGCC CGTCAACCTG TTCGTCGCCG GCTTCATCGG CTCGCCGCCG
ATGAACTTCG TCCCGGCGCG GGTGACGGGT AACGAGATCG AGCTACCGTT CGCGACCGTC
CCATTGCGCG ACGAGTGGCG CGGCTCGGTG GAGGAAGGGA AGGTTTACAT CGCCGGGATC
CGGCCGGGAG CCTTCGAAGA CGCCGAGTTC GTCGACACTG ACAAGGCCTC GCGTGGGGTC
ACTTTCGACG TCGAGATCGA TGTCACCGAA TGGCTGGGCA ACGAGCAATA CGCCTTCGTG
CCGTTCGAGG CGACGACGGA GATCTCGGGC CAGTTGGCCG AGCTGGCGAA TGAACTCGAC
AGCGAGCAGC TCCGCACGCA GATCTGTGTG GAGCTCGACC CGCTGAGCCG GGTGCGTTCC
GGAGACAAGG CCACCCTGTG GCTGGACTCG GAGCGGCTGC ACCTGTTCGA CCCGCACTCG
GGCGACAACC TGACCCGGGT CTCCCATGAG CGCCCGCGCG AGCAGAATCC ACCCGAGTCC
CGGGGCCGGC ACGCGGCGAC CGCGGGCTGA
 
Protein sequence
MAAITMRNIV KKYGDGYPAV NDVSLDIADG EFVILVGPSG CGKSTLLRMI VGLEDITSGD 
MMIGDKRVND MAPRDRNLAM VFQNYALYPH LTVFENIAFP LRLAGKLSDD EIRQRVNDAA
TTLELGEHLD RKPANLSGGQ RQRVAMGRAI VREADAFLFD EPLSNLDAKL RGQMRTEILR
LQRKLGVTTV YVTHDQTEAM TLGDRVAVLK KGVLQQVASP RELYDQPVNL FVAGFIGSPP
MNFVPARVTG NEIELPFATV PLRDEWRGSV EEGKVYIAGI RPGAFEDAEF VDTDKASRGV
TFDVEIDVTE WLGNEQYAFV PFEATTEISG QLAELANELD SEQLRTQICV ELDPLSRVRS
GDKATLWLDS ERLHLFDPHS GDNLTRVSHE RPREQNPPES RGRHAATAG