Gene Mflv_3828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3828 
Symbol 
ID4975144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4088224 
End bp4088979 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content67% 
IMG OID640458052 
Producthypothetical protein 
Protein accessionYP_001135088 
Protein GI145224410 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.254711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCC ATTCCAAGTG GGCCACCACC AAGCACAAGA AGGCCGTGAT CGACGCGCGT 
CGCGGCAAGA ACTTCGCCAA GCTCATCAAG AACATCGAGG TGGCGGCCCG CACCGGTGGC
GGTGACCCCG GCGGGAACCC GACGCTCTAC GACGCGATCC AGAAGGCCAA GAAGAACTCG
GTCCCCAACG ACAACATCGA GCGCGCCCGC AAGCGCGGCG CGGGCGAAGA GGCCGGCGGC
GCCGACTGGC AGAACATCAC CTACGAGGGC TACGGCCCCA ACGGTGTCGC GATCCTCGTG
GAATGTCTGA CCGACAACAA GAACCGCGCC GCCGGCGAGG TCCGGGTGGC GATGACCCGC
AACGGCGGCA ACATGGCCGA CCCGGGCTCG GTGGCCTACC TGTTCACCCG CAAGGGCGTG
GTGACGCTCG ACAAGAACGG GCTCAGCGAG GACGACGTGC TCGCGGCGGT GCTCGACGCC
GGCGCCGAGG ATGTCAACGA TCTGGGTGAC AGCTTCGAGA TCATCTCCGA GCCCACCGAT
CTCGTCGCGG TCCGCACGGC TCTGCAGGAT GCCGGGATCG AGTACGACTC GGCCGAGGCC
AGCTTCCAGC CGTCGGTGTC GGTGCCCGTC GACCTCGACG GTGCCCGCAA GGTGCTCAAG
CTCGTCGACG CGCTGGAAGA CAGCGACGAC GTGCAGGACG TCTACACCAA CGTCGACATC
CCCGACGACG TCGCCGCGCA GCTCGACGCC GACTGA
 
Protein sequence
MSGHSKWATT KHKKAVIDAR RGKNFAKLIK NIEVAARTGG GDPGGNPTLY DAIQKAKKNS 
VPNDNIERAR KRGAGEEAGG ADWQNITYEG YGPNGVAILV ECLTDNKNRA AGEVRVAMTR
NGGNMADPGS VAYLFTRKGV VTLDKNGLSE DDVLAAVLDA GAEDVNDLGD SFEIISEPTD
LVAVRTALQD AGIEYDSAEA SFQPSVSVPV DLDGARKVLK LVDALEDSDD VQDVYTNVDI
PDDVAAQLDA D