Gene Mflv_3588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3588 
Symbol 
ID4974906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3826374 
End bp3827864 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content73% 
IMG OID640457814 
ProductABC transporter, transmembrane region, type 1 
Protein accessionYP_001134850 
Protein GI145224172 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components 
TIGRFAM ID[TIGR02868] thiol reductant ABC exporter, CydC subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.238986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0139126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTGT CCCGTCGTGA ACCCCTGCTG GCGGCTTGGC CGCTGCTGCG GCCCCGACTG 
CCCCGCGTCG CGCTCTCCGT GCTGCTCGGG GCACTGTCGC TCGGCAGTGC CCTCGCGCTG
ACCGCGGTGT CGGCGTGGTT GATCACCCGC GCCTGGCAGA TGCCGCCGGT GCTGCATCTG
ACCGTCGCCG CCGTGACCGT GCGTGCCCTC GGCATCTCCC GGGGCCTTCT CGGATACTGC
GAACGCCTGG CGTCGCACGA CACGGCCCTG CGCGCGGCGG GCACCGCCCG AGAGCAGATC
TTCACCAGGC TGGCCGGTGG CCCGCCGGAT GCGGTGATGC GGCGCAGTAG CGGCGATCTG
GTGTCCCGCG TCGGGCAGGG GGTCGACGAC CTGGCCGACG TCATCGTCCG TGCGGTGGTG
CCCATCGGCG TCGCGGCTGT CCTCGCGATC GCCGCCGTCA CCACGATCGC GGTGATCTCC
CCGGCCGCTG CCGTCGTGCT CGCACTGAGC ATGGCGGTCG CCGGCGTCGT CGCTCCGGTT
CTCGCCGCAC GGGCCGTCAC CGCGACCGAA ACCGTTGCCG CCGAACATCA TGCGCACCGC
GATACCGCGG TGATGCTGGC ACTTGAGCAC GCCCCCGAGC TCCGCGTCAG CGGACGTCTC
GACCAGGTGC TCGCGACCGC GGGCGCCGAG CAACGCCGCT GGGGGCACGC ACTCGACCGT
GCCGCCGCAC CGGCCGCCGT GGCGGCCGCG GTTCCGACCG CGGCGCTCGG CGTGAGCGTG
GTGGGCGCCG TGCTCGCCGG TATCGCGCTG GCCTCCACCG TCGCCCCCAC GACCGTCGCG
ATCCTAATGC TGGTGCCACT GGCGGCATTC GAGGGCACCG CCGCGCTACC CGGTGCCGCG
GTCGCGCTGA CCCGCGGGCG CATCGCCGCG CAGCGGCTAC TCTCCCTCAC CGACCCCGGG
AACGACGAAG CCGACGACCG CCGTCCGGTC GTGACCCCGC CGGTGCTCGA ACCCGGGGAC
CGCGTCGCGG TCGTCGGACC CAGCGGTTGC GGCAAGACCA CGCTGCTCAT GCAGACCCCC
GGAGTGTTCT TCGCCGAGGA CGCCCATCTG TTCTCGACCA CGGTCCGCGA CAACCTGCTC
GTCGCGCGCG GGGACGCCAC CGACGACGAA CTCCTCGACG CACTGCGCCG CTGCGGTCTC
GGCCGATGGC TCGCCGGACT GTCCGACGGC CTGTCGACGG TGCTGGTCGG CGGCGCCGCG
GCGGTCTCGG CCGGTCAGCG ACGCCGACTG CTTCTGGCCC GCGCGCTGGT GTCGAACGCG
CAGACGGTGC TTCTCGACGA GCCGACCGAA CATCTCGACG CGTCGGATGC CGATGCCATC
CTGACCGGAC TCCTCACGCC GGGAGCGTTG TTCGGTCCGG AGAGAACTGT CGTCGTCGCC
ACTCATCACC TGCCGGAACA CCTCGATGTG AAGGTAATCT CCCCCACATG A
 
Protein sequence
MPVSRREPLL AAWPLLRPRL PRVALSVLLG ALSLGSALAL TAVSAWLITR AWQMPPVLHL 
TVAAVTVRAL GISRGLLGYC ERLASHDTAL RAAGTAREQI FTRLAGGPPD AVMRRSSGDL
VSRVGQGVDD LADVIVRAVV PIGVAAVLAI AAVTTIAVIS PAAAVVLALS MAVAGVVAPV
LAARAVTATE TVAAEHHAHR DTAVMLALEH APELRVSGRL DQVLATAGAE QRRWGHALDR
AAAPAAVAAA VPTAALGVSV VGAVLAGIAL ASTVAPTTVA ILMLVPLAAF EGTAALPGAA
VALTRGRIAA QRLLSLTDPG NDEADDRRPV VTPPVLEPGD RVAVVGPSGC GKTTLLMQTP
GVFFAEDAHL FSTTVRDNLL VARGDATDDE LLDALRRCGL GRWLAGLSDG LSTVLVGGAA
AVSAGQRRRL LLARALVSNA QTVLLDEPTE HLDASDADAI LTGLLTPGAL FGPERTVVVA
THHLPEHLDV KVISPT