Gene Mflv_3562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3562 
Symbol 
ID4974880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3798658 
End bp3799857 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content69% 
IMG OID640457787 
Producthypothetical protein 
Protein accessionYP_001134824 
Protein GI145224146 
COG category[S] Function unknown 
COG ID[COG2339] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.118202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.328074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCATCG CAGGCGCTCC CGGGGGTCCT CATCAATTCC ACCATCACGG CGCGCCGTTC 
GCCCGCCGCA TCCGCACAGT CGGGGCCCCG TTGGGCGTCC TCATCGCCCT GGGGACGGTC
GCCGGCCTGA TCGTCATCGT GCTGACGTTG GCCAACCCGG TCGGAACCGC GGTCGGCTTC
GTGCTGTCCA GCGTCGCGAT GGCGGTCGTC GTGCTCGCCT ATCTGTGGCT GGACCGGTGG
GAACCCGAGC CGCCACGGCT GCTCATCTTC GCGTTCATCT GGGGCACCTC GGTGGCCGTG
GTGGTCTCGG CGATCCTGCA GGTCGTCCTC GACACCTGGC TCAATCCCGG CCTCGATCCG
GACGCCGCCG ACGTGAGCGC ATTCACCCTG GTCGTCGGTG CGCCGATGAC CGAGGAAGCC
GCCAAGGGCC TGTTCCTGCT GTTGATGATG ACCGGCGCGC GCCGCAGGGA ACTGAATTCC
CTGACCGACT GCCTGGTGTA CGCGGGCCTG GTCGGCGCCG GGTTCGCCTG GCTGGAGGAC
ATCCTCTACA TCGCCAACGG CGAGTCCCTG GCCGAGTCGC TGTTCACCGC GGCGCTGCGA
CTGGTCATGG GGCCGTTCGC TCACTCGCTG TTCACCACGA TGTTCGCGCT CGGCGTGTGG
TTCGCCCTGC ACAGGCGCAC CAGGCTGGGC AAGTTCGGCT GTCTGCTGCT CGGCTATGCG
GGAGCGGTGC TTCTGCATGC GATGTGGAAC GGCTCGTCAC TGCTCGGTGC CGGCGCCTAC
TTCGGCACCT ACGTGTTCTG GATGGTCCCC GTGTTCGCGT TGACCATCGC GCTGGCCGTG
CACAGCCGCC GCCGCGAGCA GCGCATCGTG GCCGCCAAGC TTCCCGGAAT GGTCGCCGCG
TCGGTGATCA CTCCGAGCGA GGCGACGTGG CTGGGGTCGA TGCAGACCCG CAAGTACGCG
GTCGCGCAGG CGACGCGACT CGGCGGCAAG GAGGCCGGGA AGTCGGTGCG CCGATTCGCC
CACCAGGTGA CCGAGCTGGC GTTCGTCCGT GACCGCATCG ACCGGGGCTT CGGCGACGCT
CGGGTCGTCG CTCTCTTGCA GGAGGAGACC TACGCCGTGT ACGCGGCCAG GTCCGCTTCT
CCGGCGCTGC AGCAGATGGC GGGATTCTGG ACGCACGCCC CGAACGCGCC CAGGCCTTGA
 
Protein sequence
MSIAGAPGGP HQFHHHGAPF ARRIRTVGAP LGVLIALGTV AGLIVIVLTL ANPVGTAVGF 
VLSSVAMAVV VLAYLWLDRW EPEPPRLLIF AFIWGTSVAV VVSAILQVVL DTWLNPGLDP
DAADVSAFTL VVGAPMTEEA AKGLFLLLMM TGARRRELNS LTDCLVYAGL VGAGFAWLED
ILYIANGESL AESLFTAALR LVMGPFAHSL FTTMFALGVW FALHRRTRLG KFGCLLLGYA
GAVLLHAMWN GSSLLGAGAY FGTYVFWMVP VFALTIALAV HSRRREQRIV AAKLPGMVAA
SVITPSEATW LGSMQTRKYA VAQATRLGGK EAGKSVRRFA HQVTELAFVR DRIDRGFGDA
RVVALLQEET YAVYAARSAS PALQQMAGFW THAPNAPRP