| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3561 |
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| Symbol | rpsA |
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| ID | 4974879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | - |
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| Start bp | 3797059 |
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| End bp | 3798504 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640457786 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001134823 |
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| Protein GI | 145224145 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0469219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.360425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGTC CCTCCGTCAC GTCTCCGCAA GTTGCCGTCA ACGACATCGG CTCCGCGGAG
GATTTTCTCG CCGCCATCGA CAAGACCATC AAATACTTCA ACGATGGCGA CATCGTCGAA
GGGACCATCG TCAAGGTTGA CCGCGACGAA GTCTTGCTCG ACATCGGCTA CAAGACCGAA
GGCGTCATCC CTTCCCGCGA ACTCTCGATC AAGCACGACG TCGACCCCAA TGAGGTTGTG
TCCGTCGGCG ACGAGGTCGA AGCGCTGGTC CTCACCAAAG AGGACAAAGA AGGCCGCCTC
ATCCTGTCCA AGAAGCGCGC ACAGTACGAG CGCGCCTGGG GCACCATCGA AGAGCTCAAG
GAAAAGGACG AGGCCGTCAA GGGCACCGTC ATCGAGGTCG TCAAGGGCGG CCTGATCCTC
GACATCGGCC TGCGCGGCTT CCTGCCCGCA TCGTTGGTCG AGATGCGTCG TGTCCGCGAT
CTGCAGCCGT ACATCGGCAA GGAGATCGAG GCCAAGATCA TCGAGCTCGA CAAGAACCGC
AACAACGTGG TGCTCTCGCG CCGTGCCTGG CTGGAGCAGA CCCAGTCCGA GGTGCGCAGC
GAATTCCTCA ACCAGCTCAC CAAGGGCGCC ATCCGCAAGG GTGTCGTGTC GTCGATCGTC
AACTTCGGCG CGTTCGTCGA TCTCGGCGGC GTCGACGGCC TGGTGCACGT CTCCGAGCTG
TCCTGGAAGC ACATCGACCA CCCGTCCGAG GTCGTCCAGG TGGGCGACGA GGTCACCGTC
GAGGTGCTCG ACGTCGACAT GGACCGCGAG CGGGTTTCGC TGTCGCTCAA GGCAACTCAG
GAAGACCCGT GGCGTCACTT CGCCCGCACC CACGCGATCG GCCAGATCGT GCCGGGCAAG
GTCACCAAGC TGGTGCCGTT CGGTGCGTTC GTCCGTGTCG AAGAGGGCAT CGAGGGTCTG
GTGCACATCT CCGAGCTGTC CGAGCGCCAC GTCGAGGTTC CGGACCAGGT GGTCCAGGTC
GGCGACGACG CGATGGTCAA GGTCATCGAC ATCGACCTGG AGCGTCGCCG CATCTCGCTG
AGCCTCAAGC AGGCCAACGA GGACTACTCC GAGGAGTTCG AGGCCTGGAA GTACGGCATG
GCCGACAGCT ACGACGACCA GGGCAACTAC ATCTTCCCCG AGGGCTTCGA CGCCGACACC
AACGAGTGGC TCGAAGGCTT CGAGAAGCAG CGTGACGAGT GGGAGGCCCG GTACGCCGAG
GCCGAGCGTC GCCACAAGAT GCACACCGCG CAGATGGAGA AGTTCGCCGC TGCCGAGGCC
GAGGAAGCCG CCAAGCCGGC GTCGTCCAAC GGTTCCTCGC GCTCCGAGGA GTCCTCGGGC
GGTGGATCGC TGGCCAGCGA TGCACAGTTG GCTGCGCTGC GCGAGAAGCT CGCAGGCAAC
GCCTAA
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| Protein sequence | MPSPSVTSPQ VAVNDIGSAE DFLAAIDKTI KYFNDGDIVE GTIVKVDRDE VLLDIGYKTE
GVIPSRELSI KHDVDPNEVV SVGDEVEALV LTKEDKEGRL ILSKKRAQYE RAWGTIEELK
EKDEAVKGTV IEVVKGGLIL DIGLRGFLPA SLVEMRRVRD LQPYIGKEIE AKIIELDKNR
NNVVLSRRAW LEQTQSEVRS EFLNQLTKGA IRKGVVSSIV NFGAFVDLGG VDGLVHVSEL
SWKHIDHPSE VVQVGDEVTV EVLDVDMDRE RVSLSLKATQ EDPWRHFART HAIGQIVPGK
VTKLVPFGAF VRVEEGIEGL VHISELSERH VEVPDQVVQV GDDAMVKVID IDLERRRISL
SLKQANEDYS EEFEAWKYGM ADSYDDQGNY IFPEGFDADT NEWLEGFEKQ RDEWEARYAE
AERRHKMHTA QMEKFAAAEA EEAAKPASSN GSSRSEESSG GGSLASDAQL AALREKLAGN
A
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