| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3500 |
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| Symbol | xerD |
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| ID | 4974818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | - |
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| Start bp | 3726888 |
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| End bp | 3727832 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640457721 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_001134762 |
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| Protein GI | 145224084 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.385537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.347515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGTCG GAGCGGTCCT GGACGGACAG CTCCAGGGCT ACCTCGACCA CCTCGCGATC
GAACGCGGGG TCGCCGCCAA CACGCTGAGC TCTTACCGGC GCGACCTGAG GCGCTACGCC
GAGCATCTGA AGGCCCGCGG CGTCGGCGAT CTGGCCGCGG TGACCGAGAC CGACGTCAGT
GAGTTCCTGG TGGCGTTGCG CCTCGGCGAC CCCGACGGCG GAGTGGTGCC TCTGTCGGCG
GTGTCGGCGG CCAGAGCGCT GATCGCGGTG CGGGGGTTGC ACCGGTTCGC CGCCGCGGAG
GGCATCGCGG CGATCGATGT GGCGCGCGAC GTCAAACCCC CGACCCCGAG CCGCCGGCTG
CCCAAGAGCC TGAGCATCGA CGAGGTGCTG GCGTTGCTGG AGGCCGCCGG CGGAGACAGC
GAGGCGGACT CGCCGCTGAC GCTGCGCAAC CGGGCCCTGC TGGAACTGCT GTATTCGACG
GGCGCCCGCA TCTCCGAGGC CGTCGGGCTC GACATCGACG ACGTTGACAC CTCGGCCCGA
TCGGTGCTGC TGCGCGGCAA GGGGGGAAAG CAGCGACTGA TCCCGATCGG GCGTCCCGCT
GTGACGGCGC TGGAGACCTA CCTGGTTCGT GGCCGTCCCG ACCTGGCACG CCGGGGCCGT
GGGACGCCGG CGATCTTCCT CAATGCCCGC GGCGGACGCC TGTCACGCCA GAGTGCCTGG
CAGGTGCTGC AGGACGCCGC CGGACGCGCC GGGGTGACCG CGACGGTGTC GCCGCACGTG
CTGCGGCACT CGTTCGCGAC GCATCTGCTC GACGGGGGCG CCGACGTGCG CGTCGTGCAG
GAGCTGCTGG GCCACGCCTC GGTCACCACG ACGCAGATCT ACACGATGGT CACGGTGAAC
GCCCTGCGCG AGGTGTGGGC CGGCGCGCAC CCGCGCGCAC GCTAA
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| Protein sequence | MGVGAVLDGQ LQGYLDHLAI ERGVAANTLS SYRRDLRRYA EHLKARGVGD LAAVTETDVS
EFLVALRLGD PDGGVVPLSA VSAARALIAV RGLHRFAAAE GIAAIDVARD VKPPTPSRRL
PKSLSIDEVL ALLEAAGGDS EADSPLTLRN RALLELLYST GARISEAVGL DIDDVDTSAR
SVLLRGKGGK QRLIPIGRPA VTALETYLVR GRPDLARRGR GTPAIFLNAR GGRLSRQSAW
QVLQDAAGRA GVTATVSPHV LRHSFATHLL DGGADVRVVQ ELLGHASVTT TQIYTMVTVN
ALREVWAGAH PRAR
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