Gene Mflv_3483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3483 
Symbol 
ID4976640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3708749 
End bp3709519 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content68% 
IMG OID640457703 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001134745 
Protein GI145224067 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.186116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTTC GCGGATTGAC CGGCAAGGTT GCCGTCGTGG CCGGCGGCGC AACCGGATTG 
GGTGCCGCCG CCGCTACCCG CTTGGCCGAG GAAGGCTGTC GGGTGGTCGT CGGTGACGTA
TCCGAAGACG CAGCGACCCA CACGGTTCGG CGCATCACCG AGGCAGGCGG AACAGCGGTC
GCCATCGCCT TCGACCTGGC CGATCCATCC TCGGTGGCCG GCCTGTTCGC CTCAGCCGTC
GACGCCTTCA GCGATGTCGA CCTGCTCTTC AACGTCGGCG CCGACATGTC GACGATTCGG
TTCGACACCG ACGTGGTCGA CATCGACCTG GACGTGTGGG ACCGGGTGAT GACGGTAAAC
CTGCGGGGCT ATGCGGCGGC GCTGAAGTAC GCGATCCCGG TCATGCTGGA GGGTGGTGGC
GGCGCGATCG TCAACATGTC GTCGGCCGCG GCCTTCCAGG GAGAGCCTGC ACGCCCGGCG
TACGCCACGG CCAAAGCGGG CATCGGTGCG CTCACTCGCC ACGTCGCCTC CCGGTGGGGT
AAGGACGGAA TCCGGTGCAA CGCAGTGGCT CCCGGATTCA CCGCGACCGA TACCATCCGC
GCCGCTCCGC AGTGGCCGGA GTTGGAGGCG GGCGCACTGC GACGGATCCG CGGCCCCCGG
GTCGGTGCCC CGTCGGACGT GGCCGGCTTG GTCGCCTTCC TGCTGTCCGA GGAGGGAGAG
TGGATCAACG GTCAAGTCGT CAACATCGAC GGCGGTACAG TGTTGCGCTG A
 
Protein sequence
MGLRGLTGKV AVVAGGATGL GAAAATRLAE EGCRVVVGDV SEDAATHTVR RITEAGGTAV 
AIAFDLADPS SVAGLFASAV DAFSDVDLLF NVGADMSTIR FDTDVVDIDL DVWDRVMTVN
LRGYAAALKY AIPVMLEGGG GAIVNMSSAA AFQGEPARPA YATAKAGIGA LTRHVASRWG
KDGIRCNAVA PGFTATDTIR AAPQWPELEA GALRRIRGPR VGAPSDVAGL VAFLLSEEGE
WINGQVVNID GGTVLR