| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3478 |
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| Symbol | |
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| ID | 4974797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | + |
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| Start bp | 3702059 |
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| End bp | 3704407 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640457699 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001134741 |
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| Protein GI | 145224063 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.20667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.271629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTCTG GCCGCTGGCG GCTTGTGACG AGGCTGCCCA TCGCCCTGCC GGCCGCGGCG
TGCATCGGTC TCGCGGTACT GCTCGCGGTA GACCGCGGCG GCTCTGCGGT ACCGCTCATC
GACGACATCA CGATCCTCGG CCTGTCCACC TATGCGACCG TGTGCGCCGT CCTGGCCGCC
CTCTCGGCGG CTGGGCGCAT GCGCACCGCG TGGGCGATCA TGGCCGCGGC GCTGGGCTCC
TGGGCGGTCG CAGACCTTAT CTGGCTGCTG TGCGATTACG TCCTGCATAT CGAGCCGTTC
CCGTCGCCGG CCGATCTGTT CTATCTGGCG TTCAGCGTTC TAGCCGTCCC CGGCCTGCTG
GCCATGGCCC CGTTCGATGC GCTGGCAAGG AGGCAGGCGA AGATCCGCAT CACGCTCGAC
GGGATCACCG TCGCGCTGTG TGTGTTCCTG TTGGCCTGGC TGCTGGCGCT GAACACCGTC
TACGAGACCT ACCGCGACGA CACGCTGACC CTCGCTCTGG CGCTGTTGTA TCCGGCCGCC
GACATCGTGA TCCTCGCCGT GTCCGTCGCC GTACTCGCCC GCGTCGACAC TCGCCAGCGG
GCGACGCTCG GGCTGCTGGT CGTCGCCTTC GCCGTCATGG CAGTCACCGA CAGCACGTTC
GCCTACGGGG TCGCCGAGGA CAGCTACACG ACCGGCAGCA TCATCGACGT CGGATGGGCC
GTCTCGTCGG CGATGATCGG CATGGCGGCG CTCGTCAGCC GGCGGACACC ACCGCCGCGC
CCGGCGACGC TCTCGGTGCC GTCGGGCACC GCCCTGTGGG CACCGTACTT GCCTCTGCTG
GTGGCGGGCA TAGTTGTGCC TCCGCTGGTG ACCACAGGCC TGGAACGGTA CGTCGCCCCC
GCCATCGTCA TCACGGTCTG CCTGCGTCAG TTCTTCGCCG CCTGGGAGAA CCGGCAGTGG
CTCAAGGCCG CAGCCGAGCG TTCCCTGCGG GACCCGTTAA CCGGGTTGGC GAACGGCACG
CTGTTCCACG ACCGGTTGAG GCACGCGATG ATGCTGCACG CGCGCGGCGA CCGGTCGGTG
ATGGTGGTAT CGCTGGACCT CGACGACTTC GCGTTCGTCA ACGACAACCT CGGCCACCCG
GCCGCGGATC GACTGCTGGT GCACGCCGGC CGGCGGATCG CGGCGTGTGT GCGGCCCGGT
GACACCGTGG GCCGCGTCGC CGGTGACGAG TTCGCGCTGC TGCTGGAGGG CGACGTCCAC
GATTCCCAAC GGGTGCTGCA GCGAGTCGTC GCGACGTTCG ACGAACCGTT CGACGTCGAT
GGGGAACCGG TCACCATCCG GTGCAGCGTC GGGGTCGCCG TCGCGTTCGC CGACGAGCCC
GAGGTCACCC CGGAGACGAT GCTCAGACGG GCAGACATCG CGGTGCGGGT CGCCAAACGA
TCCCACTTCC CCAGGGTCCG CTTCTTCGAA GACGACATCG AGGACGACTT CGACGACGAC
ATGGCGACGA CCGATTCCGA CGCCGCGCAG GGCGGTGACC GCAGCACAGA TCGCGTGGCC
CTTACGGGCG CGGCGAAGGT CCGCCTGCTG AGCGAGTTGC GCCGCGCTGT TGATCAGGGC
GATCTGGAAC TCGCGTACCA ACCCAAGGTC GACCTGGTCA GCGGGCAGGT CGTCGGCGTG
GAGGCGCTGT TGCGGTGGCC GCATCCCGAA CTGGGGCTGC TGTATCCGGG CACGTTCATG
CCGCTGGTCC GTGAGCACAA GCTCATTCGG CCGGTGACAG ATCTGGTGAT CGACAAGGTG
CTGGACGACG CGGCGCGGTG GGTGGGCACT GGAGCGCCGA TACCGGTCGC GGTCAATCTG
TTCGCTCCGT CGCTGATCGA CGCCCGGCTG CCGGCGACGC TGCGCGCGGC TCTCGAGCGT
CGCGGTCTAC CCGCCGAGTT GTTGACCGTC GAGATCACCG AGGACCTCGT GATCAATGAT
CTGGAACGGG TCACCGCCGT CCTCGGGCAG CTCCGCGACC ACGGAATACG GGTGTCTATC
GACGATTTCG GCAGTGGCTA TTCGGCACTG TCGTACCTAC GCGACCTGTT GATCGACGAA
ATCAAGCTCG ACCGCAGCTT CATCGCAGCG GTCACGACCG ACCCGCGCGC GGCCGTGGTG
GTGCGCGCCA TCATCGAACT CACCCACGGT CTCGGCATGA CTGTGGTCGC CGAAGGCATC
GAAGAGGCGG CGACGGCGAA CTGGTTGCGT GACAGTGGAT GCGACATCGG CCAGGGCTTC
TATTTCGGCA AGCCCGTCGA CCCCGCCGAT GTCCCCAGCC TTGGCCGACT CGCAGTAGGG
CCGTCTTAG
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| Protein sequence | MGSGRWRLVT RLPIALPAAA CIGLAVLLAV DRGGSAVPLI DDITILGLST YATVCAVLAA
LSAAGRMRTA WAIMAAALGS WAVADLIWLL CDYVLHIEPF PSPADLFYLA FSVLAVPGLL
AMAPFDALAR RQAKIRITLD GITVALCVFL LAWLLALNTV YETYRDDTLT LALALLYPAA
DIVILAVSVA VLARVDTRQR ATLGLLVVAF AVMAVTDSTF AYGVAEDSYT TGSIIDVGWA
VSSAMIGMAA LVSRRTPPPR PATLSVPSGT ALWAPYLPLL VAGIVVPPLV TTGLERYVAP
AIVITVCLRQ FFAAWENRQW LKAAAERSLR DPLTGLANGT LFHDRLRHAM MLHARGDRSV
MVVSLDLDDF AFVNDNLGHP AADRLLVHAG RRIAACVRPG DTVGRVAGDE FALLLEGDVH
DSQRVLQRVV ATFDEPFDVD GEPVTIRCSV GVAVAFADEP EVTPETMLRR ADIAVRVAKR
SHFPRVRFFE DDIEDDFDDD MATTDSDAAQ GGDRSTDRVA LTGAAKVRLL SELRRAVDQG
DLELAYQPKV DLVSGQVVGV EALLRWPHPE LGLLYPGTFM PLVREHKLIR PVTDLVIDKV
LDDAARWVGT GAPIPVAVNL FAPSLIDARL PATLRAALER RGLPAELLTV EITEDLVIND
LERVTAVLGQ LRDHGIRVSI DDFGSGYSAL SYLRDLLIDE IKLDRSFIAA VTTDPRAAVV
VRAIIELTHG LGMTVVAEGI EEAATANWLR DSGCDIGQGF YFGKPVDPAD VPSLGRLAVG
PS
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