Gene Mflv_3468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3468 
Symbol 
ID4974787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3691989 
End bp3692462 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content66% 
IMG OID640457689 
Productprotein tyrosine phosphatase 
Protein accessionYP_001134731 
Protein GI145224053 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.218038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACC GCAAACCCGC AGTCCTGTTC CTGTGCACCC ACAACGCGGG ACGCTCGCAG 
ATGGCGATGG GATTCTTCAG ACATCTCGCC GCCGACCGGG CGACGGTGTA CTCGGCCGGC
TCGGAACCCG CCGCACACGT GAATCCGGCC GCCGTCGCCG CGATGGCCGA GAAGGGCATC
GACATCTCGG GACAACAGCC ACGCCGCTGG AGCACCGACA TCGTCGAGGC CGTCGATGTC
GTGGTCACCA TGGGCTGCGG CGACGAGTGT CCGTACATCC CTGGAAAGCG TTACGAGAAT
TGGGAACTCG CCGATCCCGC CGGCCGCGGT GTCGACGACG TGCGTCCCAT CCGCGACGAG
ATCGAACAGC ATGTACGCCT GCTGCTGTCC GAACTCGGAG TCGACGTCGG CGCGGTCTCG
ACCGTCCCCG AACCGCTGCA CCAGGTCATC CGGAGACTGC AGCAGGGCTC CTAG
 
Protein sequence
MADRKPAVLF LCTHNAGRSQ MAMGFFRHLA ADRATVYSAG SEPAAHVNPA AVAAMAEKGI 
DISGQQPRRW STDIVEAVDV VVTMGCGDEC PYIPGKRYEN WELADPAGRG VDDVRPIRDE
IEQHVRLLLS ELGVDVGAVS TVPEPLHQVI RRLQQGS