Gene Mflv_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3444 
Symbol 
ID4974763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3662256 
End bp3664619 
Gene Length2364 bp 
Protein Length787 aa 
Translation table11 
GC content72% 
IMG OID640457665 
ProductRNA-binding S1 domain-containing protein 
Protein accessionYP_001134707 
Protein GI145224029 
COG category[K] Transcription 
COG ID[COG2183] Transcriptional accessory protein 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.249053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCACGT CCGGCGCAGT CAAGTCTGGC CCAGCCAAAT CCGACGCAGT GAAATCCGTA 
ACCGCCCGTC TCGCTGAGGA ACTGGCTGTC GCCGAAGCCC AGGTCGCGGC CGCAGTGCGA
CTGCTCGACG AGGGCGCCAC GGTGCCGTTC ATCGCCCGCT ACCGCAAAGA GGTCACCGGC
AGCCTGGACG ACGGTCAGCT CCGGGCACTG GAGGAACGGC TCGGCTATCT GCGCGAGCTC
GACGACCGGC GCAACGCGGT GCTCGCCTCG ATCAACGAGC AGGGCAAGCT CACCGCCGAG
CTCACCGCGG CGCTGATGGC CGCCGACACC AAGGCCAGGG TCGAGGACAT CTACCTGCCG
TACAAGCCGA AGCGGCGGAC CAAGGCGCAG ATCGCCCGGG AGGCGGGGCT GCAACCGTTG
GCCGAACGCC TGCTGGCCGA CCCGTCCGTG GTGCCCGAGG AGGCGGCGGC CGAGTTCACC
TCCGCCGAGG TCGCCGACAC CGCCGCGGCC CTCGACGGCG CACGGCACAT CGTCGTCGAA
CGGGCCGCCG AAGACGCCGA GCTGGTCGGC GCCCTGCGCG AGCGGTTCTG GGAGAACGCG
TCGGCGCGCA CCCGGCCGGC GTCCGACGCC GCCGCGGCCT CGGAGAAGGG GCAAAAGTTC
CGGGACTACT TCGACCACAC CGAACCGCTG TCGTCGATGC CGTCGCACCG GGTGCTCGCC
GTGCTGCGCG GTGAGAAGGA GCAGGTGCTG TCCCTGGCGC TCGACGGGGG AGAGGACGAC
ACCTACCGGG CGATGATCGC GTCGGCGCTC GGTGTGGACC TGACCGCCGG AGCCGCCGCC
ACCCCGTGGC TGGCCGCCAC CGTCGGCTTC GCGTGGCGCA CCAGGCTCTC GGTGTCGGCG
TCGGTGGACG CGCGGGTGCG GCTGCGGTTG CGGGCCGAGG CCGACGCGGT GACGGTGTTC
GCCAGGAACC TCAAGGACCT CCTGCTCGCG GCACCGGCCG GCAACCGGAC CACCCTCGGC
CTCGACCCGG GGTTCCGCAC CGGCGTCAAG GTGGCCGTCG TCGACGGCAC CGGCAAGGTC
CTCGACACGT GCGCGATCTA CCCGCACCAA CCGCAGAAGC AGTGGGACAC CGCCAAGGCG
ACGCTCGCCG CGCTGGTCGC CCGCCACGGG GTCGAGCTGA TCGCCGTGGG CAACGGAACC
GCGTCGCGCG AGACGGATGC GCTCGCCACC GAACTGATCG CCGACATCCG CGGCGCGGGC
GGCACCGCAC CGGCCAAGGC GATGGTCAGC GAGGCCGGCG CGTCGGTGTA CTCGGCCTCG
GCGTACGCCG CCCACGAACT GCCCGACCTG GATGTGACGC TGCGCGGCGC CGTGTCGATC
GCCCGCAGGT TGCAGGACCC GCTGGCCGAG CTGGTCAAGA TCGAGCCGAA GTCGATCGGT
GTCGGCCAGT ACCAGCACGA CGTCACCCCC GGCATCCTGG CGAAGAGCCT GGGCGCCGTC
GTCGAGGACG CGGTCAACGC CGTCGGCGTC GACCTGAACA CCGCGTCGGT GCCGCTGCTG
TCGCGTGTCT CGGGCATCAC CGAATCGCTG GCCGAGGCGA TCGTCGCGCA CCGCGACCAG
ACGGGCCGTT TCCAGAACCG GCGCGCGCTG CTCGACGTTC CGCGGCTGGG CCCCAAGGCA
TTCGAGCAGT GCGCGGGATT CCTGCGCATC CGCGACGGCG ACGACCCGCT CGATGCGTCC
GGCGTCCACC CGGAGTCCTA TCCGGTGGTC CGGCGCATCC TGGACCGCGC CAACGTGACG
TTGACCGAGA TCATCGGCGA CGAGCGCGCA CTGCGGGCAC TCAAGCCCGC CGACTTCGCC
GACGACACGT TCGGCATCCC GACCGTCACC GACATCCTCG GCGAACTGGA GAAGCCGGGC
CGCGACCCCC GGCCTGCGTT CACCACCGCG ACGTTCGCGG CGGGCGTCGA GAAGGTGGCC
GACCTCAAGG CCGGGATGAT CCTCGAGGGT GTGGTCACCA ACGTCGCCGC GTTCGGCGCG
TTCGTCGACG TCGGGGTGCA CCAGGACGGG CTCGTGCACG TCTCCGCGAT GGCCGACCGC
TACGTCTCCG ATCCGCACGA GGTGGTGCGC TCGGGTCAGG TGGTCCGGGT GAAGGTCGTC
GACGTCGACG TGGAACGTCA GCGCATCGGT CTGAGCATGC GGCTCAACGA CGAGACCACG
CCGCAGCGCG GCCCGCGCCG CAACGAACGG CCCCGCACAC CGCAGCGAAA GCCGCAGCGC
CCCAACAACA CCGGCGGCCG GGAGACCGGC AAGGCGGGCG GTTCCATGGC GCGGGCGCTA
CGGGACGCCG GCTTCGGACG ATGA
 
Protein sequence
MITSGAVKSG PAKSDAVKSV TARLAEELAV AEAQVAAAVR LLDEGATVPF IARYRKEVTG 
SLDDGQLRAL EERLGYLREL DDRRNAVLAS INEQGKLTAE LTAALMAADT KARVEDIYLP
YKPKRRTKAQ IAREAGLQPL AERLLADPSV VPEEAAAEFT SAEVADTAAA LDGARHIVVE
RAAEDAELVG ALRERFWENA SARTRPASDA AAASEKGQKF RDYFDHTEPL SSMPSHRVLA
VLRGEKEQVL SLALDGGEDD TYRAMIASAL GVDLTAGAAA TPWLAATVGF AWRTRLSVSA
SVDARVRLRL RAEADAVTVF ARNLKDLLLA APAGNRTTLG LDPGFRTGVK VAVVDGTGKV
LDTCAIYPHQ PQKQWDTAKA TLAALVARHG VELIAVGNGT ASRETDALAT ELIADIRGAG
GTAPAKAMVS EAGASVYSAS AYAAHELPDL DVTLRGAVSI ARRLQDPLAE LVKIEPKSIG
VGQYQHDVTP GILAKSLGAV VEDAVNAVGV DLNTASVPLL SRVSGITESL AEAIVAHRDQ
TGRFQNRRAL LDVPRLGPKA FEQCAGFLRI RDGDDPLDAS GVHPESYPVV RRILDRANVT
LTEIIGDERA LRALKPADFA DDTFGIPTVT DILGELEKPG RDPRPAFTTA TFAAGVEKVA
DLKAGMILEG VVTNVAAFGA FVDVGVHQDG LVHVSAMADR YVSDPHEVVR SGQVVRVKVV
DVDVERQRIG LSMRLNDETT PQRGPRRNER PRTPQRKPQR PNNTGGRETG KAGGSMARAL
RDAGFGR