Gene Mflv_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3439 
Symbol 
ID4974758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3656598 
End bp3657872 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content69% 
IMG OID640457660 
Productmajor facilitator transporter 
Protein accessionYP_001134702 
Protein GI145224024 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.681123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.892025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCAC CGGCGGCAGC CGAAACCACC AGCGACACCC ACGGACCCAC CCGGGCGTGG 
TCGGCCGTCT GTGTGCTCGC GGTCGTCGGC ACACTGAACT ACGCCGACCG CTTCCTGCCC
GCGGTGCTGG CCGAACCGAT CCGCGAAGAC CTGTCGTTGT CGGACACCGC GATCGGGGTG
ATCAACGGCT TCGGATTCCT CGCCGTCTAC GCACTGATCG GCATCCCGAT CGCGCGCATC
TCCGACCGGG GCGCCTACGG GCTGGTGATC TCGGGCTGTC TGTCGCTGTG GGGCGTGATG
ACGATGCTGG GCGGCGCCGT GCAGTCGGGG TTCCAGCTCG CGATGACCCG CGTGGGTGTG
GCGATCGGCG AGGCAGGGTC GACGCCCGCG GCGCACGCCT ACGTCGCCCG CAACTTCGCC
CCGGAGCGCC GTGCCGCGCC ACTGGCGGTC ATCACGCTGG CCATCCCGCT CGCCAGTGCG
GCCAGCCTGA TCGGCGGCGG TCTGCTCGCG CAGGCGCTGG GCTGGCGGAC CGCCTTCGTC
GTGATGGGGG CGATCAGCGT CCTGTTCGTG CCGGTGGTCC TGGCCGTGGT CGGACGCAGG
CAGAAACCAC TCGTCGAATC TGTTGCGGTG CAGCAGGTCC CGGTGAAGTG GTGGGACATC
CTGCGCAAGC CCAGCTATCT CGCGATCGTC GCCGGCGCGG CGTCCATCTC CGTGGCCGGA
TACGCGTTGA CGACGTTCGC ACCGGCGTTC CTGATGCGAG CCCGCGGCAT GACGCTGGGC
GACGTCGGCC TGCAGTACGG CATCGCCAGC GGCGTCACCG GCATCCTCGG GCTGCTCGTC
GTCGGCAAGG TCGCCGACCG GTTGTCGGCC CGGGATCCGC GTTGGCTGCT GTGGCTGGTG
GCGCTGATGA CCGCGGCGCT GATCCCGTTC TCGACGCTCG GGCTGCTCGT GGCCAGCCCC
GGCCTGGCGG TGCTCTTCAT ATCGCTGAGC TATGTCGTCG GCACGGCGTA CATGGCGCCG
TCGATCGCGG CAATCCAGCG CCTGGTGCCG GCCGAACAGC GAGCCACCGC GTCGGCGATC
TTCCTGTTCT TCAGCGCGAT CCTCGGCTCG GCGGGCCCGT TCGTGGCGGG ATTGATCAGC
GACGCGATGA AGGCCGAACT CGGCTCCGGG TCGCTGGGGC GCGCGTTGTT GTGCGTCGTA
CCAGTGATGC ACCTGGTCGC CATCGGCTGC TACCTGCTGG CGAGCCGGCG TTATCTGCGT
GAGCTGGTGA ACTAG
 
Protein sequence
MSAPAAAETT SDTHGPTRAW SAVCVLAVVG TLNYADRFLP AVLAEPIRED LSLSDTAIGV 
INGFGFLAVY ALIGIPIARI SDRGAYGLVI SGCLSLWGVM TMLGGAVQSG FQLAMTRVGV
AIGEAGSTPA AHAYVARNFA PERRAAPLAV ITLAIPLASA ASLIGGGLLA QALGWRTAFV
VMGAISVLFV PVVLAVVGRR QKPLVESVAV QQVPVKWWDI LRKPSYLAIV AGAASISVAG
YALTTFAPAF LMRARGMTLG DVGLQYGIAS GVTGILGLLV VGKVADRLSA RDPRWLLWLV
ALMTAALIPF STLGLLVASP GLAVLFISLS YVVGTAYMAP SIAAIQRLVP AEQRATASAI
FLFFSAILGS AGPFVAGLIS DAMKAELGSG SLGRALLCVV PVMHLVAIGC YLLASRRYLR
ELVN