Gene Mflv_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3409 
Symbol 
ID4974729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3624243 
End bp3626144 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content68% 
IMG OID640457631 
ProductABC transporter 
Protein accessionYP_001134673 
Protein GI145223995 
COG category[R] General function prediction only 
COG ID[COG4178] ABC-type uncharacterized transport system, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.547153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACCG AGTTGAGCGC CCAGACGTTC CAGCCGACCC TCGACTGGGG CCGCGAGTTC 
GTGCACTCCG GGCAGTGGAT CGCGGTCACG TTCGCGGCCA CCGCGGTGTG CCTCCTGGTG
GTCCTCGCGC TGCTGGCCCA CTTCACCGAA TGGGGCCGCC AGTTCTGGCG TGTCACCGGC
GACTACTTCC GCGGCAGGCA CAGCGTGATC GCGTGGGCGA TGGTCGCGGC GCTGCTGCTG
TCGGTCATCG TGTCGGTGCG CATCAACGTG CTGCTGACCT ATTACGTCAA CGACCTGTTC
ACCTCGCTGC AGGTCGCGTT CCAGGGCGGG ATGGCCAGCG GCGTCGCCGG GTTCTGGGCG
TCGATGCGTG TGTTCGCCGT GCTCGCGGTG TGTTTCGTGG TCCGGGTTCT GCTCGACATG
TACCTCACCC AGCGCTTCAT GATGCGCTGG CGGGTGTGGC TGACCCGCCG CTTCATCGAT
GACTGGCTGA GCGACCTGTC CTACTACCGC GCCCAGTTCT CCGGCCGGCC GATCGACAAT
CCGGACCAGC GCATCCAGCA GGACGTCGAC GTGTTCACCG CCGGGGTCGG TGGCACACCG
AACAACCCGA TCTTCAACTC GGGCAACACC CTGTTGTTCG GAGCCGTCGA GGCCGTGTTG
TCGGTGCTGT CGTTCGGGCC GATCCTGTGG CGGCTGTCGG AGCCGGTGAG CATCGGCGGG
ATGACGCTGC CGCGGGCCCT GTTCTGGATC GTGGTCGTCT ACGTGCTGGT CGCGACGATC
ATCGTGTTCG CCATCGGCAG GCCGCTGATC CGGCTGAGCT ACCTCAACGA GTTGCGCAAC
GCCGGGCTGC GCTACGCGCT CGTGCGGGTG CGTGACGCCG GGTCGGCGAT CGGCCTCTAC
CGCGGCGAGC CCGCCGAACG GTCGGTCCTG AAGAGCCGGC TCGACTCGGT GATGGACAAC
TACCGCGGCT GGCTGAACCG GATGATGCTG TACTTCGGCT GGAACGTCTC GGTGAGCCAG
ACCATCAATC CGCTGCCCTG GCTGGTGCAG GCGCAGGGGC TGTTCGCGCA GCGCATCACC
TTCGGCGATG TGTGGCAGTC CTCGAACGCG TTCGGCGCCA TCCACGACTC GCTGTCGTTC
TTCCGCAACG CCTACGACCA GTTCGCGAGC TACCGCGCCG CGATCATCCG CCTCGACGGA
CTCGTCGACC AGAACGCCCG CGCCGGAGCG TTCACCGCCG TCGACACCGG GGCCTCCGAG
GACGGTGCGC TGGCGGTGCG GGGGGTGGAG GTGCGCAAGC CGGACGGGTC GCCGCTGGTG
CGCCCGCTCG ATCTGCGGCT GGGATCCGGT GACGGACTGG TGATCACGGG ACCGTCGGGT
ATCGGCAAGA CGGTGCTGGT GCAGAGCCTG GCCGGGATGT GGCCCTACGC GACGGGCCGG
GTGGAGCTGC CGGACGGACG CGACGGCGCG ATGTTCGTCC CGCAGTTGCC GTACCTGCCC
GTCGGGGACC TGCGCACGGT GGTGAGCTAT CCGGAACCCG CGGGCACCTA CGACGACAAG
GCCGTCCAGC AGGCACTGCT CGATGTGGCG TTGTCGCAGT TGGTGATCCG CCTCAACGAC
GACCAGGACT GGGCGAAGGT CCTCTCGGTC GGCGAGCAGC AGCGCATCGC GTTCGCCCGC
ATCCTGGTGT TGCGGCCCAG GACGGTGTTC CTCGACGAGT CGACCTCGGC GATGGACGAG
GGGCTGGAGC AGATGCTCTA CACCCTGCTG CGCACGACGT TGCCCGACAC CATCGTCGTC
AGTGTCAGCC ACCGGTCGTC GGTGCTGCCG TTCCACACCG ACCACCTCGA GCTGGTCGGC
GACGGCGAAT GGCGACTGGA ACGACTCGAC GCTCCGCGGT AG
 
Protein sequence
MDTELSAQTF QPTLDWGREF VHSGQWIAVT FAATAVCLLV VLALLAHFTE WGRQFWRVTG 
DYFRGRHSVI AWAMVAALLL SVIVSVRINV LLTYYVNDLF TSLQVAFQGG MASGVAGFWA
SMRVFAVLAV CFVVRVLLDM YLTQRFMMRW RVWLTRRFID DWLSDLSYYR AQFSGRPIDN
PDQRIQQDVD VFTAGVGGTP NNPIFNSGNT LLFGAVEAVL SVLSFGPILW RLSEPVSIGG
MTLPRALFWI VVVYVLVATI IVFAIGRPLI RLSYLNELRN AGLRYALVRV RDAGSAIGLY
RGEPAERSVL KSRLDSVMDN YRGWLNRMML YFGWNVSVSQ TINPLPWLVQ AQGLFAQRIT
FGDVWQSSNA FGAIHDSLSF FRNAYDQFAS YRAAIIRLDG LVDQNARAGA FTAVDTGASE
DGALAVRGVE VRKPDGSPLV RPLDLRLGSG DGLVITGPSG IGKTVLVQSL AGMWPYATGR
VELPDGRDGA MFVPQLPYLP VGDLRTVVSY PEPAGTYDDK AVQQALLDVA LSQLVIRLND
DQDWAKVLSV GEQQRIAFAR ILVLRPRTVF LDESTSAMDE GLEQMLYTLL RTTLPDTIVV
SVSHRSSVLP FHTDHLELVG DGEWRLERLD APR