| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3388 |
|---|
| Symbol | |
|---|
| ID | 4974708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 3580319 |
|---|
| End bp | 3581167 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640457610 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_001134652 |
|---|
| Protein GI | 145223974 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.264053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCTC AAAGCACGGT GAAGACGGCG CCACGCCGGG CAGCGATCCC GCAGGCCGTG
CGGCCGCGGG TGTCGGCGAT CCAGCAGTGG TGGGTGCTGA CGGTCCGGAT GATCATCCCG
ACGCTGCGCA ACGGCGAACT CGCCACGCAG GTCGTCGGCT CGATCGTGTT CACCGTCGGC
TATTACCTGC CGCTCAAGCA GATGATGGGC GCGGTTCAGC CGCTCAGCAG CTACGCGCAG
TATCTGACGC CGCTGATCGT GCTGCAGGCG ATCTGGTTCG CTGCGATCTC GGCGGCGTTC
CGGTCGGCGA CCGACTCGGT ACAGGGCATC AACCGACGAT TCCGCGCGAT GCCGATCCCG
TCGAGCACGC CGCTGGCTGC CCGGATGACG GCAAGCATGT ACCGCTGCTG CATTGCGCTC
GCGGTGTCGG TGGGCTGCGG TTACGTGATC GGCTTCCGCT TCGAGGCGGG CGTGCTGGGC
ATCCTCGGCT TCGTCGGGCT GGCACTGCTG ATCGGTGCGG CGCTCGCGAT CATCGGCGAT
CTGATCGGCG TCGCGACGCA GAACCCGGAG GCGACGGCCC CGATGATGCT GATTCCGCAG
CTGACGCTGG GACTCGCATC GGTCGGTCTG CAGCCGGTGG AGCAGTTCCC GGACTGGATT
CAGGGCTTCG TCCGCAACCA GCCGCTGTCA CAGTGGGTCT ACGCGCTACA GGCGCTCGCC
GGTGACAGCA CCGACGCGGC CCCTGACCCG ACGGTGGCGG TGCTGGGGTC CGCGGTGGCG
TGGGCGGTGG GCTGCATCGT GGTGGCGCTG ACGCTGCACG TCTGGGTCAG CAGGAGGCGG
CGCTCATGA
|
|---|
| Protein sequence | MTAQSTVKTA PRRAAIPQAV RPRVSAIQQW WVLTVRMIIP TLRNGELATQ VVGSIVFTVG
YYLPLKQMMG AVQPLSSYAQ YLTPLIVLQA IWFAAISAAF RSATDSVQGI NRRFRAMPIP
SSTPLAARMT ASMYRCCIAL AVSVGCGYVI GFRFEAGVLG ILGFVGLALL IGAALAIIGD
LIGVATQNPE ATAPMMLIPQ LTLGLASVGL QPVEQFPDWI QGFVRNQPLS QWVYALQALA
GDSTDAAPDP TVAVLGSAVA WAVGCIVVAL TLHVWVSRRR RS
|
|---|
| |