Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_3341 |
Symbol | |
ID | 4974661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 3525804 |
End bp | 3528275 |
Gene Length | 2472 bp |
Protein Length | 823 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640457563 |
Product | putative phosphoketolase |
Protein accession | YP_001134605 |
Protein GI | 145223927 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3957] Phosphoketolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0136973 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACCG CCACCACTGC CGAGCGCAAA CCGCTGAGCG ACCAGGACGT CGACCGTCTG GACCGGTGGT GGCGCGCCGC CAACTATCTG TCCGTCGGCC AGATCTACCT GCTCGACAAT CCGCTGCTGC GCACCCCGCT GACCCGCGAG GACGTCAAAC CCCGGTTGCT CGGCCACTGG GGCACCACCC CGGGGTTGAA CTTCCTCTAC GCCCATCTCA ACCGCGCGAT CGCGCAGCGA CAGCAGTCGA CCATCTACGT GACCGGTCCC GGCCACGGCG GACCCGGCCT GGTGGCCAAC GCGTATCTCG ACGGCACCTA CAGCGAGATC TACTCCGACA TCACCCAGGA CGACGAGGGT CTGCGCCGGC TGTTCCGGCA GTTCTCGTTC CCCGGCGGCA TCCCGTCGCA CGTCGCCCCC GAGACGCCCG GCTCCATCCA CGAGGGCGGT GAACTCGGCT ACGCGCTGTC CCACGCCTAC GGCGCCGCGT TCGACAACCC CGACCTGCTG GTCGCCGCGG TCGTCGGCGA CGGAGAGGCC GAGACCGGCC CGCTGGCCAC CAGTTGGCAT TCCAACAAGT TCGTCAACGC CGCCAAGGAC GGCGCGGTGC TGCCGATCCT GCACCTCAAC GGCTACAAGA TCGCCAACCC GACGCTGCTG GCCCGCATCC CCACCGACGA ACTGCGCGCA CTGATGGTCG GCTACGGCCA TCACCCGTAC TTCTTCGAGG TCCCCGACGA CGAGGGCGGT CCCGGCGTGG ACCATGCGGA TGCCCACCGG CGCTTCGCGG CACTGCTCGA CGACGTCCTC GACGAGATCG ACGACATCAA GACCCGCGCG CGCGAGGGTG ACGAGTCCCG CCCGGCGTGG CCGATGATCG TGTTCCGCAC CCCGAAGGGC TGGACCGGAC CGGACTACAT CGACGGCAAG AAGACCACCG GATCGTGGCG GGCCCACCAG GTGCCGCTGT CCAATGCCCG GGACACCAAA GAGCATCTGG CCGTCCTGTC GGACTGGCTG TCCTCCTACC GCCCGGACGA ACTGTTCGAC GCCGACGGCC GACTGCTGCC CGAGATCGCC GAGCTCGCGC CGTCGGGGCA GCTGCGGATG AGCGACAACG CGCACGCCAA CGGCGGGTTG TTGCTCAAGG ACCTGCGACT GCCGGACTTC CGTGAGTACG CCGTGGACGT GCCGGCACCG GGTGCGACCG TCGCCGAGGC CACCCGCGTT CTCGGTCAGT GGCTGACCGA GGTGATCCGG CTCAATCCGG ACAATTTCCG GATCTTCGGT CCTGATGAGA CCGCGTCCAA CAGGTTGCAG GCCGTCTACG ACGCCACCGA CAAGCAGTGG AACGCCGAGT TCTTCGGCGC CGAGGTCGAC GAACACCTCG CACGTGCCGG ACGGGTCGTC GAGATGCTCT CCGAACACCA GTGCCAGGGC TGGCTGGAGG GTTACCTGCT CACCGGCAGG CACGGCCTGT TCAACTGCTA CGAGGCGTTC ATCCACATCG TCGACTCGAT GCTCAACCAA CACGCCAAAT GGCTCAAGGT CACCAACCAC ATCCCGTGGC GGCGACCCAT CGCCAGCCTG AACTACCTGC TGTCGAGCCA CGTCTGGCGC CAGGACCACA ACGGGTTCTC CCACCAGGAT CCTGGCTTCA TCGATCACGT CGTGAACAAG AGCGCCAAGG TGGTCAGGGT GTATCTGCCG CCGGACGCCA ACACGCTGCT GTCCACCTAC GACCACTGCC TGCGCTCGCG GCAGTACGTC AACGTGGTGG TCTCTGGAAA GCAGCCGTCG CCGAACTTCC TGACCATGGA ACAGGCGGTC GCGCACTGCA CCCGCGGCCT CGGGATCTGG GAGTGGGCGG GTTCCGAGGA ACTCGGCACC GACCCCGACG TCGTGCTGGC CTCCGCGGGC GACATCCCCA CGCTGGAGGC GCTGGCCGCC GCCGACATCC TGCGCCAGCA CCTGCCCGAC CTGAAGGTGC GCTTCGTCAA CGTGGTCGAT CTGATGCGGC TGCAGGATTC GACCGAGCAT CCGCACGGGC TGCCCGACCG CGACTTCGAC ATGATCTTCA CCACCGACAG GCCGATCATC TTCGCCTACC ACGGCTATCC GTGGCTGATC CATCGCCTCA CCTACCGCCG CGCCGGGCAC GACAACCTGC ATGTGCGCGG CTACAAGGAG GAGGGCACGA CCACGACGCC CTTCGACATG GTCATGCTCA ACGACCTCGA CCGCTATCAC CTGGTCATGG ACGTCATCGA CCGGGTTCCG TCGCTGGGTT CGACGTGTGC GACGTTGCGC CAGCAGATGG CGGACAAGCG CATCGCGGCA CGTGAGTACA CGCGGGCGCA CGGCGAGGAC ATCCCCGAGG TCAAGGACTG GGTGTGGCCC GCCGCGCGCG AGTCCGGCTT CGGCACCGCG GGCGCTGACG GCGCGTCGTC GACAGGTGGC GACAACGAAT AG
|
Protein sequence | MTTATTAERK PLSDQDVDRL DRWWRAANYL SVGQIYLLDN PLLRTPLTRE DVKPRLLGHW GTTPGLNFLY AHLNRAIAQR QQSTIYVTGP GHGGPGLVAN AYLDGTYSEI YSDITQDDEG LRRLFRQFSF PGGIPSHVAP ETPGSIHEGG ELGYALSHAY GAAFDNPDLL VAAVVGDGEA ETGPLATSWH SNKFVNAAKD GAVLPILHLN GYKIANPTLL ARIPTDELRA LMVGYGHHPY FFEVPDDEGG PGVDHADAHR RFAALLDDVL DEIDDIKTRA REGDESRPAW PMIVFRTPKG WTGPDYIDGK KTTGSWRAHQ VPLSNARDTK EHLAVLSDWL SSYRPDELFD ADGRLLPEIA ELAPSGQLRM SDNAHANGGL LLKDLRLPDF REYAVDVPAP GATVAEATRV LGQWLTEVIR LNPDNFRIFG PDETASNRLQ AVYDATDKQW NAEFFGAEVD EHLARAGRVV EMLSEHQCQG WLEGYLLTGR HGLFNCYEAF IHIVDSMLNQ HAKWLKVTNH IPWRRPIASL NYLLSSHVWR QDHNGFSHQD PGFIDHVVNK SAKVVRVYLP PDANTLLSTY DHCLRSRQYV NVVVSGKQPS PNFLTMEQAV AHCTRGLGIW EWAGSEELGT DPDVVLASAG DIPTLEALAA ADILRQHLPD LKVRFVNVVD LMRLQDSTEH PHGLPDRDFD MIFTTDRPII FAYHGYPWLI HRLTYRRAGH DNLHVRGYKE EGTTTTPFDM VMLNDLDRYH LVMDVIDRVP SLGSTCATLR QQMADKRIAA REYTRAHGED IPEVKDWVWP AARESGFGTA GADGASSTGG DNE
|
| |