| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3327 |
|---|
| Symbol | |
|---|
| ID | 4974647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 3509575 |
|---|
| End bp | 3511590 |
|---|
| Gene Length | 2016 bp |
|---|
| Protein Length | 671 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640457549 |
|---|
| Product | protein of unknown function DUF893, YccS/YhfK |
|---|
| Protein accession | YP_001134591 |
|---|
| Protein GI | 145223913 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.60724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.042406 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCATGG GGCTGACAGT GCGTTCGGTA CTGCCGGATG CTGCTGCCGC CCTGCGCAGC
CTGGCAGCGG TCGGTGTGAT CGCGGTGATC GCAGCGCTCT GGGGACCGCC GGGATCGGCG
ACGTCCGCCG TCGCGGTGGC CGCCGTGGCC GGAGCCACGG CCTTTCAGGA CAGCCCGCGG
TCGCGGATCC CGCTCGTCTA CCTGGTGTCG GGACTCTGCG GTGTCGCGGT GCTGCTCGGC
ACGGCGGTGT CCGGGTTGCC GGTGCTTTTC CTCCTGCTGT GCGCGCTGTG GTGTGCCGGC
GTGGCGATGC TGTGGGCGCA CGGGCCCAAC ACCGGTCTGA TCGGGGCGGC CTCGGGGGCG
CTGATGGTGG CCGCAACGTC GGCCGGCACA CCGGTGTCGG TGGGCGCCGC GTTGGGCACG
GCCGCGCTGG CCGTCGTCGG TGGCCTGTCC CAGGCCGTGG TCCTCGCGGT GTGGCCGCCG
CAACGCTGGC GTGCGCAGCG CGACGCCGTG GTGGCCGCCT ACCGGTCGCT GGCCGCCGAC
GCCCGGCGCC TGGCCGACGG GCGCGACGAC GGCTGGGCCG TCGACACCGA ACCGCTTGTG
GCGCTGCGTG AGGCGTTCAC CGACGTCTCC GGTCCGACGC TACGCCGTCC GGCGGTGTAC
CGCGGGTGGT ACGCGCTACC GGAGCGCATC GCCGCGACGC TGACCGACAT GGCGAACGGT
CCTCGCTCCG AGGCGTTGTC GCGCGTCCTC GAAGAGGCCG CCGACACGAT GGCGGCGGTC
GCCGACACGA GCCGCGCCGG CCGCGTCGGC ACCCACGTCT CGATCGGCCG CTTCGACAGC
GTCGTGACCG AGATCGACGG GCCCGAGTCC GGCACCGTGC GACGACTCTC GGCCCTGCTG
CACGAAGTGG CGGCGATGCG GCTCGGCGAC TTCGTCCCGT CCACTCCCGA CGCGGTGCGC
CTGCGGCGCC CGGAGCTGCC CACGTCGGTG CGCTCGGCGA TGGACACGGT CCGCGGCCAC
CTCAACCAGG ACTCCCCGGT GCTGCGCCAC GCGGTGCGGG TCGGCGCCGC AGTCGGTCTC
GGCGGGGGTA TCGCGCAGTA CGCCGGCATT CCCTACGGCT ATTGGATCCC CCTGACGGCG
CTGCTGGTGT TGCGCCCGGA AACCGCGCAT ACCTACACCC GTTGTGTCGG GCGGGTTGCC
GGCACCGCGG CCGGCGTCGT CGTCGCCTCG GCGGTGCTGG TTCCGTTCGC ACCCGCTCCG
GTCGTTTCGC TGGGATTCGC AGTCGTCGCG GTGGGCATCG CGTATCTGGT GTCGGGCGTC
GGCTACATCG CGATGTCGGG CGCCGTGGCG GCCGCAGCGG TCTTCCTGCT GGACGTGGCA
CGCGCAGGCA CGCCGTCCTC GCTGACCGAT CCGCTGATCG CGACGATCGC AGGAGGCGCG
CTGGCGGTCA TCGCGCACGT CGCGCTGCCC GACGACGAGT TGACCCGGCT GGCACAACGG
GCGGGCGAGC TGCTCAAGAC CGAGATCGAC TACGCCGCCA CGGTGATCAA GGGATATGTG
CACGAGCGGG AGAACGCCAC CGAGGAGATG ACCGCTGCGT GGCAACGGGT GTCCAGGGCG
CGCTCGGCCT TCGAGGCCAC GACGGGTGCG ATGCGGCTGG AGTCACGGGA CTTCCGGCTC
TGGCTGCGCT CGTACCGCAC GGCGATCAAC TCGCTGACGA GTTCGTGCAC GACGCTGGAA
GCCCACATGC CGACCCGGCC GGCGGGCGTG GACCGCGAAT TCGCGATCAC CGTCGACGAA
TTCGTGGAGG CGCTGTGCGG AGATCCACCG ACCGCCGCGT CGCCGTGGAC GGTGGATGCC
GCGGAACTGG AGGCGGCGGC GCAGCGGTTG CGGGAGGCCG CCCCGCGGGA ACGCGCGGAG
GACGGTTCCT CACGGGTGCT CGTCGCCGAG GCGACTGCGA TCACCCGTAG CCTGACCGCG
GTGGCGATCA GCCCCGTGCC CATCTCGGCT CGATGA
|
|---|
| Protein sequence | MIMGLTVRSV LPDAAAALRS LAAVGVIAVI AALWGPPGSA TSAVAVAAVA GATAFQDSPR
SRIPLVYLVS GLCGVAVLLG TAVSGLPVLF LLLCALWCAG VAMLWAHGPN TGLIGAASGA
LMVAATSAGT PVSVGAALGT AALAVVGGLS QAVVLAVWPP QRWRAQRDAV VAAYRSLAAD
ARRLADGRDD GWAVDTEPLV ALREAFTDVS GPTLRRPAVY RGWYALPERI AATLTDMANG
PRSEALSRVL EEAADTMAAV ADTSRAGRVG THVSIGRFDS VVTEIDGPES GTVRRLSALL
HEVAAMRLGD FVPSTPDAVR LRRPELPTSV RSAMDTVRGH LNQDSPVLRH AVRVGAAVGL
GGGIAQYAGI PYGYWIPLTA LLVLRPETAH TYTRCVGRVA GTAAGVVVAS AVLVPFAPAP
VVSLGFAVVA VGIAYLVSGV GYIAMSGAVA AAAVFLLDVA RAGTPSSLTD PLIATIAGGA
LAVIAHVALP DDELTRLAQR AGELLKTEID YAATVIKGYV HERENATEEM TAAWQRVSRA
RSAFEATTGA MRLESRDFRL WLRSYRTAIN SLTSSCTTLE AHMPTRPAGV DREFAITVDE
FVEALCGDPP TAASPWTVDA AELEAAAQRL REAAPRERAE DGSSRVLVAE ATAITRSLTA
VAISPVPISA R
|
|---|
| |