| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3286 |
|---|
| Symbol | |
|---|
| ID | 4974607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 3472848 |
|---|
| End bp | 3473981 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640457509 |
|---|
| Product | 2-nitropropane dioxygenase, NPD |
|---|
| Protein accession | YP_001134551 |
|---|
| Protein GI | 145223873 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.347515 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATACTC CCCTGTGCGA CCAATTGGGT ATCGAGTTCC CGATCTTCGC CTTCACCCAC
TGCCGCGACG TCGTCGTCGC CGTCAGCAAG GCCGGCGGGT TCGGCGTCCT CGGCGCGGTG
GGCTTCTCGC CCGAGCAGCT CGAGATCGAG CTGAACTGGA TCGACGAGAA CATCGGTGAC
CACCCCTACG GCGTCGACAT CGTGATCCCG AACAAATACG AGGGCATGGA TGCCGCCGAC
ATGGACCCCG AGGTCCTGAA GAAGACGCTC AACGATCTCG TGCCCGAGGA GCACATCGAT
TTCGCGAAGA AGATCCTCTC CGACCACGGC GTACCGGTCG ACCACAGCGA CGACGATGCG
CTGCAACTGC TCGGCTGGAC CGAGGCGACC GCGACCCCGC AGGTCGAGGT CGCGCTGCGG
CACCCGAAGG TCACGATGAT CGCCAACGCG CTCGGCACCC CGCCCGCTGA CATGATCAAG
CACATCCACG ACGAAGGCCG TGTGGTCGCG GCACTGTGCG GGTCGCCGTC TCAGGCGCGC
AAGCACGCCG ACGCCGGGGT GGACATCATC ATCGCCCAGG GCGGCGAGGC CGGCGGCCAC
TGCGGCGAGG TCGGCTCGAT CGTGCTGTGG CCGCAGGTGG TCAAGGAGGT CGCTCCGGTG
CCGGTGCTGG CCGCCGGCGG TATCGGCAGC GGCCAGCAGA TCGCCGCGGC GCTGGCGCTG
GGCGCGCAGG GCGCGTGGAC CGGTTCGCAG TGGGTGATCG TCGAGGAGTC GGAGAACACG
CCGGTGCAAC ACGAGGCCTA CATCAAGGCC GGTAGCCGCG ACACCGTGCG CAGCCGCTCC
TTCACCGGCA AGCCGGCGCG CATGCTGCGC AACGACTGGA CCGAGGCGTG GGAGGACGAG
AACAACCCCA AGCCGCTCGG AATGCCGCTG CAGTACATGG TCTCCGGAAT GGCGGTGGCC
GCGACGCACA AGTACCCGAA CGAATCCGTC GACGTCGCGT TCAACCCGAT CGGCCAGGTG
GTCGGTCAGT TCACCAAGGT CGAGAAGACC GCGACGGTGA TCGAGCGCTG GGTTCAGGAG
TACCTGGAGG CGACCGGCCG GCTCAACGAA CTCAACGAGG CGGCAAGCGT CTAG
|
|---|
| Protein sequence | MHTPLCDQLG IEFPIFAFTH CRDVVVAVSK AGGFGVLGAV GFSPEQLEIE LNWIDENIGD
HPYGVDIVIP NKYEGMDAAD MDPEVLKKTL NDLVPEEHID FAKKILSDHG VPVDHSDDDA
LQLLGWTEAT ATPQVEVALR HPKVTMIANA LGTPPADMIK HIHDEGRVVA ALCGSPSQAR
KHADAGVDII IAQGGEAGGH CGEVGSIVLW PQVVKEVAPV PVLAAGGIGS GQQIAAALAL
GAQGAWTGSQ WVIVEESENT PVQHEAYIKA GSRDTVRSRS FTGKPARMLR NDWTEAWEDE
NNPKPLGMPL QYMVSGMAVA ATHKYPNESV DVAFNPIGQV VGQFTKVEKT ATVIERWVQE
YLEATGRLNE LNEAASV
|
|---|
| |