Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_3198 |
Symbol | |
ID | 4974519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 3384873 |
End bp | 3386975 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640457421 |
Product | ATPase |
Protein accession | YP_001134463 |
Protein GI | 145223785 |
COG category | [V] Defense mechanisms |
COG ID | [COG1401] GTPase subunit of restriction endonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0922607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTACGG AAACTGCGCG GCAAAGCATC GTCGAAGCAT TGGCGTCCTG GGACAGGCCA GCGGCCGCCA AGCGCGCAGC CGACGCTGAG AAGATGCGCG TCGAGTTCGT CCAGCGGTTC CCTACCGCAG CCTGGCCCAC ACTGCCGCTC GAAGACTATG CGCTAGGACA GGACAACCTG GACACAGTGT CGTACTGGCT GGAGTACAAG ACTCTCGACA TTGGCAGCAT CAAAGGCGGC TCCTCGTCGA AGCACCTGAT ATACCGACGT CGAGAAGACG GAACCTGGCG ATACCCCAAG GAATACGACT CACCAGAACA GGCCTGGGAC ACGATCCGGG CCGGTTTCGT CGACATGCTA AAACTCGCTG ATCGAAGTGA TTTCGACGGC CTCGACGAAA TCAAGGCGCT CACCGGTGCA CCAGCGGTCC GCACGAAATT GCTGTACATG TACTTTCCGG ACGAATTCGT GCCGGTCTCA TCACGCGCTG CTATCGATCA CTTCCTGCAA GTCTTAGGAG ACGAATCACC ATCTACGTCG GCGGTCCGCG GTAACCGGCA ATTGCTCTCC GCGCTTCGCC AGATCCCGGA ACTGTCCGAC CTGACCAACC AGGAACTCGG ACACTTCCTC TACCACTGGC ACGACCCGCG CCCCTCACAG CGGGTCGTCA AGATCGCTCC CGGCGAGCGG GCCATGTTCT GGCCGGACTG TCTCGAGAAC TCCTTCATCT GCGTCAGCTG GGATGAGGTC GGTGACCTCA CCCTGTACGA AACGAAGGAA ACGTTCAAGG ATGAGTTCCG AAAGCACTTT CCGTACAACG GGGTCGAGCG CCAGGTGAGC CGAAAGGCCA ACGAACTGTG GACGCTCATG GAACTCCAAC CCGGGGACAC CGTGATCGCG AACCGCGGTG TTTCCGAGGT CCTGGCAGTC GGGACCGTCA ATGATACCGG CTACGTGTGG CGTCCCGAGC GCGACCAATA CAAGCACACC GTAGGCGTCG ACTGGGATAC TTCACAAGCC AAGCCTATTG CGCCTGTGAA AGGTTGGGCA ACCACAACCG TTTCCAAGGT GTCTGCAGGT CTGCTCCGAC AGATAACCGG CCAGAGCCCG ACTCCCAAGC CTGTCGACGC TGATGCCCGA TACCTTGATC TGGATGCGGC GCTTCATCGC CGCGGACAGA TCGTCCTTTA CGGCCCGCCA GGTACCGGCA AGACGTACAT CGCACGCCGT GCCGCGGTGT GGTTTCTCGA AGGCGGCAGT GGCAGCGACC AGGCCAATGC TGTGCTTGCG GACGACGATC TGTTGAAGTC GCGCGAGCAC GCCCTATCCC TGCCGTCGTC CGATCCCATG AAGGCCACTC GCTTGACTCG GGTCACCTTC CACCCGTCCT ATGCGTACGA GGACTTCATC GAAGGGTTCC GCCCACAGCA GTCAGTCAGC GGCGCGATGA ACCTGATGCT GTCCGATGGA ACCTTCAAAC GTGTCTGTAA CACCGCCCAG CAAGACCCTG CACACACCTA CGTCGTCGTC ATCGACGAGA TCAACCGCGG CAACATACCG AAGATCTTCG GTGAACTCAT CACTCTCATC GAGAAGGACA AACGCGGCCT GACAGTTCAA TTGCCTCAAA GCGGAGCACC TTTCGCAGTT CCCAAGAACG TGTACATCAT CGGGACCATG AACACCGCCG ATCGCAGCAT CCATCTGCTG GACACCGCTC TGCGCAGAAG ATTCCAGTTC ATCGAGTTGC TGCCCGATAG CGATCTCTTG GAGGGGCACA CTGTCGGCGC GTTGGCCCTC GATGCATTCC TCGACGGGCT GAATGATGCG ATTCGCCAGA AGTTCGGGCG CGACAAGCAG ATCGGTCATG CGATGTTCTT CCAGCACGGG GAGATCATCG ACAAACCAGA AGATTTCGCT GCTGTTTTCC GATACGAGTT GCTCCCGCTA CTTCAGGAGT ATCTGTTCGA AGATTACGCC GCTCTGGCAG ATCTGGTCGG CAGCGTCATC GATGTCGAGG CGCAGCGCCT CGCCGAAAGC GCCAATGACC CCGAGACTCT TTGCGAGGAA CTGGCGAACA AGTTCGGAAG CGCGTCGGCG TGA
|
Protein sequence | MATETARQSI VEALASWDRP AAAKRAADAE KMRVEFVQRF PTAAWPTLPL EDYALGQDNL DTVSYWLEYK TLDIGSIKGG SSSKHLIYRR REDGTWRYPK EYDSPEQAWD TIRAGFVDML KLADRSDFDG LDEIKALTGA PAVRTKLLYM YFPDEFVPVS SRAAIDHFLQ VLGDESPSTS AVRGNRQLLS ALRQIPELSD LTNQELGHFL YHWHDPRPSQ RVVKIAPGER AMFWPDCLEN SFICVSWDEV GDLTLYETKE TFKDEFRKHF PYNGVERQVS RKANELWTLM ELQPGDTVIA NRGVSEVLAV GTVNDTGYVW RPERDQYKHT VGVDWDTSQA KPIAPVKGWA TTTVSKVSAG LLRQITGQSP TPKPVDADAR YLDLDAALHR RGQIVLYGPP GTGKTYIARR AAVWFLEGGS GSDQANAVLA DDDLLKSREH ALSLPSSDPM KATRLTRVTF HPSYAYEDFI EGFRPQQSVS GAMNLMLSDG TFKRVCNTAQ QDPAHTYVVV IDEINRGNIP KIFGELITLI EKDKRGLTVQ LPQSGAPFAV PKNVYIIGTM NTADRSIHLL DTALRRRFQF IELLPDSDLL EGHTVGALAL DAFLDGLNDA IRQKFGRDKQ IGHAMFFQHG EIIDKPEDFA AVFRYELLPL LQEYLFEDYA ALADLVGSVI DVEAQRLAES ANDPETLCEE LANKFGSASA
|
| |