Gene Mflv_3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3109 
Symbol 
ID4974430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3292877 
End bp3294046 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content69% 
IMG OID640457332 
Productglycine betaine/L-proline ABC transporter, ATPase subunit 
Protein accessionYP_001134374 
Protein GI145223696 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID[TIGR01186] glycine betaine/L-proline transport ATP binding subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGAGC AAGCCGCACC TACCGGAGTG CGCATCGAAC TCGACCACGT GTCGAAGGTC 
TATCCCGGCG CGAAACAACC AGCGGTCGAC GACGTCTCGT TGGAGATCCC GGCCGGTGAG
ATCGTGATCT TCGTCGGCCC GTCCGGGTGC GGCAAGACCA CCACGATGCG GATGATCAAC
CGCCTCAGCG AGCCGACCTC GGGCCGGATC CTGATCGGCG ACAAGGACGC GTTGTCGATC
AAGCCCACCG AGCTGCGCCG CTCCATCGGG TATGCGATCC AGCAGGCCGG CCTCTTCCCG
CACATGACGA TCCGGCAGAA CGTCGGCCTG GTCCCGGGTC TGCTGGGCTG GGACCGCAAG
CGGATCGGCG ACCGGGTCGA CGAGCTGCTC GATCTCGTCG GTCTGGAACC CGCCCAGTAC
GCCGAGCGCT ATCCGCGGCA GCTCTCCGGC GGCCAGCAGC AGCGCGTCGG GGTGGCGCGG
GCGCTGGCCG CCGATCCACC GGTGCTGCTG ATGGACGAGC CGTTCGGCGC CGTGGACCCG
ATCACCCGCA GCACACTGCA GGACGAGTTG CTCCGGCTGC AGAACGAGCT GCGCAAGAGC
ATCGTGTTCG TCACCCACGA CTTCGGGGAG GCCGTGAAGC TGGGGGACCG CATCGCCGTC
CTCGGCCAGC AGTCCAAGGT GCTGCAGTAC GACACCCCGC AGAACATCCT CGCCAGCCCG
GCCGACGACA CCGTGGCCGG CTTCGTCGGT TCCGGAGCCT CACTGCAGCA GCTCGGTCTG
CTGCGCGTGA AGGACGTCGC CCTCGAACCC CGGCCCTCGG TGCACCGCGG CGACAGCGTC
GAGCAGGCGC GCGCGGTGAT CGGCGCCAGC GACCACGACT GGGCCGTGGT GCTCGACGAC
CGCGACCGGC CCGTCAACTG GGTCCGCGAG AGCCGCCTGC GGCACGCCGG CGCGCTGGCC
GACGCGGTGG AGAAACTCGA CGTCGTGAGC ACGTACTCGA CGTTGGAAGA CGCGCTGGAG
GCGATCCTGG CCGAGCAGCA CGCATCGGCG GTCGTCGCGG GGCCGAACAA CCGCTACGAA
GGTGTGGTCA CCCTCGACAC CCTCATCGAC ACCATCACCA GGCTTCGCGC CGAAGCCGAG
GCGTCCACCG GTGCGGGAGA CCCGAGTTGA
 
Protein sequence
MTEQAAPTGV RIELDHVSKV YPGAKQPAVD DVSLEIPAGE IVIFVGPSGC GKTTTMRMIN 
RLSEPTSGRI LIGDKDALSI KPTELRRSIG YAIQQAGLFP HMTIRQNVGL VPGLLGWDRK
RIGDRVDELL DLVGLEPAQY AERYPRQLSG GQQQRVGVAR ALAADPPVLL MDEPFGAVDP
ITRSTLQDEL LRLQNELRKS IVFVTHDFGE AVKLGDRIAV LGQQSKVLQY DTPQNILASP
ADDTVAGFVG SGASLQQLGL LRVKDVALEP RPSVHRGDSV EQARAVIGAS DHDWAVVLDD
RDRPVNWVRE SRLRHAGALA DAVEKLDVVS TYSTLEDALE AILAEQHASA VVAGPNNRYE
GVVTLDTLID TITRLRAEAE ASTGAGDPS