Gene Mflv_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3108 
Symbol 
ID4974429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3292233 
End bp3292880 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content67% 
IMG OID640457331 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001134373 
Protein GI145223695 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.915347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTCGC TGTGGGATTA CGTCTCCACC CACTATCAGC AACTGGCTTT CGACTCCTAT 
CAGCACGTCA GCGCAGTGGT TCAGAGCGTG CTCCTCGCAA CCGTCATCGG TGTGGCCATC
GGGGTGCTGA CCTACCGCAA CTCCCTGGCG GCCAATCTGG CGACCGCGAC GTCGAGCGTG
ATCCTGACGG TGCCGTCCTT CGCGCTGCTC GGTCTGCTGA TCCCGCTGTT CGGTCTCGGG
GTGATCCCCA GCGTCGCCGC GCTGGTGCTC TATTCGCTGC TCCCGATCAT CCGCAACACG
ATCGTGGGCC TCAACGCCGT CGACCCGGCG CTGACCGACG CTGCGCGGGG CATCGGGCTG
AGCCGGTTGC AGACGCTGGG CCGGGTCGAA CTGCGGCTCG TGTGGCCGGC CATCCTGTCG
GCGATGCGGC TGTCGACGCA GATGTCGATG GGCGTGCTGG CGATCGCGGC CTACGTCAAG
GGCCCCGGCC TGGGCAACCT GATCTTCGCC GGGCTGGCCC GGGTCGGCAG CCCGACCGCG
CTTCCGATGG CGCTGAGCGG CACGTTGCTC ATCGTGATCC TGGCACTCCT CCTCGATGCC
GCCCTGGTGC TCCTCGGGCG GCTCACGACG TCGAAAGGCA TTCGGTGA
 
Protein sequence
MNSLWDYVST HYQQLAFDSY QHVSAVVQSV LLATVIGVAI GVLTYRNSLA ANLATATSSV 
ILTVPSFALL GLLIPLFGLG VIPSVAALVL YSLLPIIRNT IVGLNAVDPA LTDAARGIGL
SRLQTLGRVE LRLVWPAILS AMRLSTQMSM GVLAIAAYVK GPGLGNLIFA GLARVGSPTA
LPMALSGTLL IVILALLLDA ALVLLGRLTT SKGIR