| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3084 |
|---|
| Symbol | |
|---|
| ID | 4974405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 3264905 |
|---|
| End bp | 3266425 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640457307 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_001134349 |
|---|
| Protein GI | 145223671 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | [TIGR03428] permease, urea carboxylase system |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.150726 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.347515 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGATCA ATCAACCGCA TGCCGACAGC GGCATGCAGG ATTTCGGGTA CAAGGAGTCG
CTGGACCGCA GTATCGGCAA GTTCGCGAGC TTCGCCGCGG GCGTCAGCTA CATCTCGATC
CTGACCGGCA CCTTCCAGCT TTTCTACTTC GGTTTCGGCA CCGCCGGTCC GGCATACCTG
TGGTCCTGGC CCCTCGTGTT CGTCGGTCAG ATGGCCGTCG CGCTGTGCTT CATGGAGCTC
GCCGCCAAGT ACCCGGTGGC CGGGTCGGTC TACAACTGGA GCAAGAAACT CGCCAGCCGC
CTGGTGGGCT GGACGTCGGG TTGGCTGATG CTGACGGCGT CGATCGTGAC GATCTCGGCG
GTCGCGCTGG CCTACCAGCT GAACCTGCCG CGGCTGTGGA GCGGATTCCA GATCATCGGC
GACGGCAGCG GCACCTACGA CTATGCCGCC AACGCGGTGC TGCTCGGCTC CCTGCTGATC
GCGTTCACCA CCCTGGTGAA CGCACTCGGC GTGCGCCTGA TGTCGAGGAT CAATTCCAGC
GGCGTCTTCA TCGAGTTGAT CGCCGCCGTG CTGATCGTGT TCCTGTTGGC GATCAACGTG
CAGCACAGCC CCGAGATCTT CTTCTCCACC AACGGATACG GCGCCGGCGA GAGCATGGGC
TTCCTCGGCG CCTTCCTGAT CGCCTCGCTG GCGTCGGGCT ATGTGATGTA CGGCTTCGAC
ACCGCGAGCT CGCTCGGTGA GGAGACCGTC GAGCCGCGCC GCACCGCGCC CAAGGCGATC
GCGCGGGCGA TCCTGGCGTC CTTCGTGATC GGCGGCGGAA TCCTCGTCTT CGCGGTGATG
GCCGCACCGA ACCTGCAGGA TCCGCAGTTG GGGGAGAGCA GCGGCGGTCT GCAGTACATC
GTCCAGCAGG TCATGTGGGG CCCGCTGGGC ACGATCTTCC TGGCCTGCAT CGTCATCGCG
GTCACGGTGT GCTGTCTGGC GGTGCACACC GCGGCGATCA GGCTGACGTT CGCGATGGCC
CGCGACAATG CGTTGCCGTT CGGGGAGAAG CTCGCCACCG TGAACCCGAA GACCCAGACC
CCGATCGTCC CGGCGGTGAC GATCGGGATC ATCTCGATAC TGATCCTGGT CATCAATGTC
GCCAACGTCC AGATCTTCAC GGTGCTGACG TCGATCGCGA TCATCATGAT CTATCTCGCC
TACCTGATGG TCACGGGGCC GCTGCTGAAG AAGCGGATCC AAGGGCATTG GCCGCCACCG
GATCTCAAGG AGGGCGGCTA CTTCACCATG GGTAAGTGGG GGATGCCCGT CAACATCGTC
GCCGTGATCT GGGGCATCGG GATGGCGTTG AACCTCGCCT GGCCCCGCGC GGCGGTCTAC
GGCGAGGGCT GGTATTACGA GTGGGGCGCG TTCATCTACA TCGGGGTGAT CCTCGGCGCC
GGTCTGGTGT GGTATTTCGT CAAGGGCCGC AACCACATCG GCACACTGAA GTCGCACGCT
GCCGAGAGCC TCGATGGCTG A
|
|---|
| Protein sequence | MVINQPHADS GMQDFGYKES LDRSIGKFAS FAAGVSYISI LTGTFQLFYF GFGTAGPAYL
WSWPLVFVGQ MAVALCFMEL AAKYPVAGSV YNWSKKLASR LVGWTSGWLM LTASIVTISA
VALAYQLNLP RLWSGFQIIG DGSGTYDYAA NAVLLGSLLI AFTTLVNALG VRLMSRINSS
GVFIELIAAV LIVFLLAINV QHSPEIFFST NGYGAGESMG FLGAFLIASL ASGYVMYGFD
TASSLGEETV EPRRTAPKAI ARAILASFVI GGGILVFAVM AAPNLQDPQL GESSGGLQYI
VQQVMWGPLG TIFLACIVIA VTVCCLAVHT AAIRLTFAMA RDNALPFGEK LATVNPKTQT
PIVPAVTIGI ISILILVINV ANVQIFTVLT SIAIIMIYLA YLMVTGPLLK KRIQGHWPPP
DLKEGGYFTM GKWGMPVNIV AVIWGIGMAL NLAWPRAAVY GEGWYYEWGA FIYIGVILGA
GLVWYFVKGR NHIGTLKSHA AESLDG
|
|---|
| |