Gene Mflv_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3078 
Symbol 
ID4974399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3257097 
End bp3257852 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content67% 
IMG OID640457301 
Product20S proteasome, A and B subunits 
Protein accessionYP_001134343 
Protein GI145223665 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.136631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTTCC CGTATTTCAT CTCGCCCGAG CAGGCGATGC GTGAGCGTTC CGAGCTCGCG 
CGCAAGGGCA TCGCCCGCGG CCGCAGCGTC ATCGCGCTCG CGTACGCCGA CGGTGTGCTG
TTCGTCGCGG AGAACCCGTC CCGGTCGTTG CAGAAGGTCA GCGAACTCTA CGACCGCGTC
GGCTTCGCTG CGGTCGGCCG GTTCAACGAG TTCAACAATC TTCGCAGTGG TGGGATCCGG
TTCGCCGACA CCCAGGGGTA TGCGTACTCC CGGCGTGACG TGACCGGGCG TCAGCTGGCC
AATGTGTACG CGCAGACCTT GGGCACGATC TTCACCGAGC AGGCCAAGCC CTACGAGGTG
GAGCTGTGCG TCGCCGAGGT CGCCCACTAC GGCGAGACCA AGGCGCCCGA GCTGTACCGC
ATCACCTACG ACGGATCGAT CGCCGACGAG CCGCACTTCG TGGTCATGGG CGGTACCACC
GAGCCGATCG CGACCGCGCT CAACGAGTCC TACGCCGAGA ACGCCAGCCT GGAGGACGCC
GTGCGGATCG CGGTGGCAGC GTTGGGCGCC GGAGGCAATG GCGCAGAACC GCGGACGCTC
GGACCCTCCA CGCTGGAGGT GGCGATCCTC GATGCGAACC GGCCGCGGCG CGCGTTTCGC
CGGATCACCG GTGCCGCGCT GGAAGCGCTT CTGCCACAGG CGGATACGAA GGACGACTCG
CAGGATTCCG AAGGCGCTGC CGAACCCGAC GCCTAG
 
Protein sequence
MSFPYFISPE QAMRERSELA RKGIARGRSV IALAYADGVL FVAENPSRSL QKVSELYDRV 
GFAAVGRFNE FNNLRSGGIR FADTQGYAYS RRDVTGRQLA NVYAQTLGTI FTEQAKPYEV
ELCVAEVAHY GETKAPELYR ITYDGSIADE PHFVVMGGTT EPIATALNES YAENASLEDA
VRIAVAALGA GGNGAEPRTL GPSTLEVAIL DANRPRRAFR RITGAALEAL LPQADTKDDS
QDSEGAAEPD A