Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_3055 |
Symbol | |
ID | 4974376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 3237663 |
End bp | 3239147 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640457278 |
Product | sugar transporter |
Protein accession | YP_001134320 |
Protein GI | 145223642 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.177873 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGGTC AGGGTGGTCC AGCCGGGGAG AGCCCGGAAC TGTACGAGAA GGGCCAGGAC TTCTCGTCCG GCAAGACCGC GATCAGGATC GCCTCGGTGG CCGCCCTCGG CGGCCTGCTG TTCGGCTACG ACAGCGCGGT GATCAACGGG GCGGTCGCGT CGATCCAGGA AGACTTCGGC ATCGGCAACT ACGCCCTCGG GCTCGCGGTC GCGTCGGCGC TTCTCGGCGC GGCGGTCGGC GCCCTGTCCG CCGGGCGCAT CGCCGACCGG ATCGGGCGCA TCGCGGTGAT GAAGATCGCC GCCGTGCTGT TCCTGCTCAG CGCCTTCGGA ACGGCATTCG CCCCCGAGAC CATCACCCTG GTGATCGGCC GGATCGTCGG CGGCGTCGGT GTCGGCGTCG CCTCGGTGAT CGCACCGGCC TATATCGCCG AGACGTCACC GCCGGGCATC CGCGGCCGGC TCGGCTCGTT GCAGCAGCTC GCCATCGTGT CCGGCATCTT CGCGTCGTTC GCGGTGAACT ACCTGCTGCA GTGGCTGGCC GGCGGCCCGA ACGAGCCGCT GTGGCTGGGG ATGGACGCCT GGCGCTGGAT GTTCCTCGCG ATGGCGGTGC CCGCCGTCGT CTACGGCGGC CTGGCGTTCA CGATCCCGGA GTCACCGCGC TATCTCGTTG CCACGCACAA GATCCCGGAA GCCCGTCGGG TGCTGAGCAT GTTGCTGGGG CAGAAGAACC TGGAGATCAC CATCACCCGG ATCCGGGAGA CGCTGGAACG CGAGGACCGG CCGTCGTGGC GTGACCTGAA GAAACCGACC GGCGGGATCT ACGGCATCGT CTGGGTCGGC CTGGGTCTGT CGATCTTCCA GCAGTTCGTC GGCATCAACG TGATCTTCTA CTACTCCAAT GTGCTGTGGC AGGCCGTCGG ATTCAGTGCC GACGAGTCCG CGGTCTACAC CGTGATCACG TCGGTGGTCA ACGTGCTGAC CACGCTCATC GCGATCGCAC TGATCGACAA GATCGGGCGC AAACCGCTAC TGCTGATCGG TTCGGTCGGG ATGGCGGTCA CCCTCTCCAC GATGGCGTTC ATCTTCGCCA ATGCCGAGCT GATCGAGAAC GAGGCCGGCG AGATGGTGCC GAGCCTGCCG GGCGCGTCGG GTGTGATCGC GCTGATCGCG GCGAACCTGT TCGTCGTCGC ATTCGGCATG TCCTGGGGCC CGGTGGTGTG GGTCCTGCTC GGCGAGATGT TCCCCAATCG GATCCGGGCC GCCGCGCTCG GCCTGGCCGC GGCGGGACAG TGGACGGCGA ACTGGGTCAT CACCGTGTCC TTCCCCGAGC TGCGCAATTT CCTCGGCGCC GCCTACGGTT TCTACGCCCT GTGCGCCGTG CTGTCGGGGT TGTTCGTGTG GAAGTGGGTG AGGGAGACCA AGGGCGTGTC GTTGGAGGAC ATGCACGGCG AGATCCTGCA CGGCGACAAG TCTGCGACCG GCTGA
|
Protein sequence | MAGQGGPAGE SPELYEKGQD FSSGKTAIRI ASVAALGGLL FGYDSAVING AVASIQEDFG IGNYALGLAV ASALLGAAVG ALSAGRIADR IGRIAVMKIA AVLFLLSAFG TAFAPETITL VIGRIVGGVG VGVASVIAPA YIAETSPPGI RGRLGSLQQL AIVSGIFASF AVNYLLQWLA GGPNEPLWLG MDAWRWMFLA MAVPAVVYGG LAFTIPESPR YLVATHKIPE ARRVLSMLLG QKNLEITITR IRETLEREDR PSWRDLKKPT GGIYGIVWVG LGLSIFQQFV GINVIFYYSN VLWQAVGFSA DESAVYTVIT SVVNVLTTLI AIALIDKIGR KPLLLIGSVG MAVTLSTMAF IFANAELIEN EAGEMVPSLP GASGVIALIA ANLFVVAFGM SWGPVVWVLL GEMFPNRIRA AALGLAAAGQ WTANWVITVS FPELRNFLGA AYGFYALCAV LSGLFVWKWV RETKGVSLED MHGEILHGDK SATG
|
| |